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. 2020 May 22;8:e9205. doi: 10.7717/peerj.9205

Table 3. Reports of function of most abundant taxa found in this study in both, human milk and neonatal stool.

Taxa Immune function Reference Colonization and metabolism Reference
Propionibacterium Associated with growth inhibition and spread of S. aureus. Shu et al. (2013) Involved in early gut colonization in breastfeed infants. Best natural producer of propionate and lactate. Rocha Martin et al. (2019)
Propionibacterium mitigates intestinal inflammation via Th17 cell regulation and maintenance of T-cells and IL-10 in infants fed with breast milk. Colliou et al. (2017), Morrow et al. (2013) Prepares the gut environment for late colonizers such as Faecalibacterium and Coprococcus, which depend on the presence of SCFA. Morrow et al. (2013)
Protective factor against the development of necrotizing enterocolitis in preterm infants. Colliou et al. (2017)
Sphingomonadaceae Modulation and maintenance of the immune response. D’Auria et al. (2013) Colonizer of the breast ductal system and mammary tissue. Chan et al. (2016)
Potent stimulator of NK cells and cytokine release through its glycosphingolipids. Long et al. (2007) Ability to degrade aromatic hydrocarbons mainly associated with breast cancer. Urbaniak et al. (2014)
Clostridiaceae Promotes the protection against chemically induced colitis through the development of FOXP3+ T Reg cells in mice. Atarashi et al. (2011) Associated with carbohydrate metabolism by pentose metabolism. Cynkin & Delwiche (1958)
Protection against IgE-mediated disease. Kamada et al. (2013), Morrison & Preston, 2016 Butyrate producer. Morrison & Preston (2016)
Promotes the generation of Th17 cells in mice by stimulating IL-6 and IL-23. Atarashi et al. (2011)
Staphylococcus Development of the neonatal immune system. Lundell et al. (2009) First colonizer of the gut tract in the first month by overexpression of adhesion-related genes. Martín et al. (2012)
Super antigen function stimulates the systemic secretion of IgA in neonates, protecting against allergies. Martín et al. (2012) Ability to degrade high concentration of oligosaccharides in human milk. Duncan et al. (2002), Urbaniak et al. (2016)
Bifidobacterium The pili and extracellular polysaccharides promote the modulation of the infant immune system without causing an adverse inflammatory response. Induction of T-reg cells via butyric acid and propionic acid in mouse models and cell lines. Turroni et al. (2010) Exceptional capacity to participate in the saccharolytic fermentation of carbohydrates, which end −products that positively affect host cells and gut bacterial community. Tanaka & Nakayama (2017)
Decrease the incidence of allergies. Bottacini, Van Sinderen & Ventura (2017) Early gut colonizer, with high capacity to persist and to colonize. Turroni et al. (2010)