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. 2020 May 9;21(9):3365. doi: 10.3390/ijms21093365

Table 1.

BME treatment-induced changes in the expression levels of genes involved in neurogenesis-related signaling pathways in the hippocampus. The down-regulation of genes is indicated by the values in brackets. The function of each gene was identified by Genecards (https://www.genecards.org) and/or Mouse Genome Databases (http://www.informatics.jax.org).

Signaling Pathway Gene Products Gene Symbol Fold Change p-Value Neurogenesis-Related Function Citation
Neurotrophin signaling pathway NT3 NTRK2 (TrKB) 1.325 < 0.0001 Receptor tyrosine kinase is involved in the development and the maturation of the central and the peripheral nervous systems through regulation of neuron survival, proliferation, migration, differentiation, and synapse formation and plasticity. Receptor for BDNF/brain-derived neurotrophic factor and NTF4/neurotrophin-4, alternatively, can also bind NTF3/neurotrophin-3, which is less efficient in activating the receptor but regulates neuron survival.
NTRK3 (TrKC) 1.501 < 0.0001 NTF3/neurotrophin-3, NTRK3, autophosphorylates and activates different signaling pathways, including the phosphatidylinositol 3-kinase/AKT and the MAPK pathways, which control cell survival and differentiation.
PI3K-Akt PP2A Ppp2r3d (1.342) 0.005 Cell proliferation
Ppp2r1a (1.371) 0.012 Cell death, cell differentiation, cellular component organization
Ppp2r5a (1.228) 0.009 Lipid metabolic process, protein metabolic process, response to stimulus, signaling
Ppp2r5b (1.354) 0.008 Cell differentiation, cellular component organization, nucleic-acid-templated transcription, protein metabolic process response to stimulus, signaling, system development
PI3K class IA Pik3ca 1.342 0.009 Cell death, cell population proliferation, establishment of localization, homeostatic process, lipid metabolic process, protein metabolic process, response to stimulus
signaling, system development
Pik3cb 1.351 0.001 Cell death, establishment of localization, homeostatic process, immune system process, lipid metabolic process, response to stimulus, signaling, system development
Pik3r1 1.367 0.008 Cell death, cell differentiation, cell population proliferation, cellular component organization, establishment of localization, homeostatic process, immune system process, lipid metabolic process, nucleic-acid-templated transcription, protein metabolic process,
response to stimulus, signaling, system development
Pik3cg 1.968 0.000 Cell death, establishment of localization, homeostatic process, immune system process, lipid metabolic process, protein metabolic process, response to stimulus
signaling, system development
AKT Akt1 (1.282) 0.035 Cell death, cell differentiation, cell population proliferation, cellular component organization, establishment of localization, homeostatic process
immune system process, lipid metabolic process, nucleic-acid-templated transcription, protein metabolic process
response to stimulus, signaling, system development
Akt3 1.615 < 0.0001 Cell population proliferation, cellular component organization, establishment of localization, homeostatic process
GF HgfP 2.213 0.035 Cell death, cell differentiation, cell population proliferation, cellular component organization
PKC PrkcaR 1.546 < 0.0001 Cell death, cell differentiation, cell population proliferation, cellular component organization, establishment of localization, homeostatic process, immune system process
Prkcb 1.249 0.000 Cell death, cellular component organization, establishment of localization, homeostatic process, immune system process, nucleic-acid-templated transcription protein metabolic process, response to stimulus signaling system development
CREB pCREB Creb1 1.337 0.016 Cell differentiation, cellular component organization, signaling, system development
Atf2 1.323 0.003 Cell death, cell differentiation, cell population proliferation, cellular component organization, establishment of localization
Cholinergic receptor ChAT ChatE 3.970 0.005 Cell differentiation, cellular component organization, signaling, system development
M2 Chrm2 1.582 0.003 Establishment of localization, response to stimulus, signaling
M5 Chrm5 2.592 0.000 Establishment of localization, lipid metabolic process, response to stimulus, signaling