Table 2.
Pangenome distribution of the genes for each species, using 70C/70S (70% Contiguously aligned/70% sequence Similarity) criteria.
S. mitis | S. pneumoniae | S. pseudopneumoniae | ||||
---|---|---|---|---|---|---|
n = 36 | n = 32 | n = 13 | ||||
n | % | n | % | n | % | |
Core | 1,007 | 19.5 | 1,306 | 35.0 | 1,169 | 31.1 |
Soft-core | 1,196 | 23.2 | 1,495 | 40.1 | 1,614 | 42.9 |
Cloud | 2,856 | 55.4 | 1,232 | 33.0 | 1,626 | 43.2 |
Shell | 1,101 | 21.4 | 1,004 | 26.9 | 522 | 13.9 |
Pangenome | 5,153 | 3,731 | 3,762 |