Table 1.
An overview of bioinformatics resources for plant circRNAs.
| Name | Description | Web links | Latest release | Reference |
|---|---|---|---|---|
| PcircRNA_finder | An integrated software for circRNA prediction in plants. | http://ibi.zju.edu.cn/bioinplant/tools/manual.htm | 2017 | Chen et al., 2016 |
| CircPro | An integrated tool for circRNA protein-coding potential. | http://bis.zju.edu.cn/CircPro/ | 2017 | Meng et al., 2017 |
| AtCircDB | A tissue-specific database for Arabidopsis circular RNAs. | http://genome.sdau.edu.cn/circRNA | 2018 | Ye et al., 2019 |
| PlantCircNet | A database of plant circRNA-miRNA-gene regulatory networks. | http://bis.zju.edu.cn/plantcircnet/ | 2018 | Zhang et al., 2017 |
| ASmiR | A comprehensive database of miRNA targets in alternatively spliced linear and circRNAs. | http://forestry.fafu.edu.cn/bioinfor/db/ASmiR | 2019 | Wang H. Y. et al., 2019 |
| CropCircDB | A database for crops in response to abiotic stress. | http://deepbiology.cn/crop/ | 2019 | Wang K. et al., 2019 |
| PlantcircBase | A comprehensive database of plant circRNAs in 16 organisms. | http://ibi.zju.edu.cn/plantcircbase/index.php | 2019 | Chu et al., 2017, 2018 |
| CircFunBase | A database for functional circular RNAs. | http://bis.zju.edu.cn/CircFunBase/index.php | 2019 | Meng et al., 2019 |