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. 2020 May 19;14:22. doi: 10.3389/fninf.2020.00022

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Copyright © 2020 Deruelle, Kober, Perles-Barbacaru, Delzescaux, Noblet, Barbier and Dojat.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Comparison of pipelines. Top: Fitting pipelines. Bland-Altman representation of difference between T1 relaxation times for all regions of interest (n = 29), averaged across all animals (n = 40) and obtained with three different fitting pipelines. Left: T1 differences for fC1 minus fC2; Middle: T1 differences for fC1 minus fC3; Right: T1 differences for fC2 minus fC3. The sC4 was used for segmentation. Solid line: Mean difference. Dash-lines: ± two standard deviations. Bottom: Segmentation pipelines: Bland-Altman graph of the T1 (left) and T2 (right) differences measured for all regions of interest (n = 29), averaged all animals (n = 40) and obtained with two different segmentation pipelines (one point per region of interest). The fC1 fitting pipeline was used. Solid line: mean difference. Dash-lines: ± two standard deviations.