Table 2.
Glide SP docking score of the selected poses of derivatives 1–18. RMSD of the docking poses within each triplet (INDZ vs. IMID 1 and IMID 2 analogues). 1 RMSD based on the core and carboxamide portion. 2 RMSD based on the whole molecule. Ref. stands for reference compound.
ID | Core | Glide SP Docking Score (kcal/mol) | RMSD Core + Carboxamide (Å) 1 | RMSD (Å) 2 |
---|---|---|---|---|
1 | INDZ | −8.48 | Ref. | Ref. |
7 | IMID 1 | −8.58 | 0.44 | 1.24 |
13 | IMID 2 | −8.69 | 0.34 | 0.76 |
2 | INDZ | −8.77 | Ref. | Ref. |
8 | IMID 1 | −7.94 | 0.45 | 1.36 |
14 | IMID 2 | −8.44 | 0.43 | 0.92 |
3 | INDZ | −8.88 | Ref. | Ref. |
9 | IMID 1 | −8.28 | 0.15 | 0.70 |
15 | IMID 2 | −8.25 | 0.19 | 0.39 |
4 | INDZ | −8.44 | Ref. | Ref. |
10 | IMID 1 | −7.91 | 0.18 | 1.00 |
16 | IMID 2 | −7.72 | 0.15 | 1.51 |
5 | INDZ | −8.16 | Ref. | Ref. |
11 | IMID 1 | −8.51 | 0.22 | 0.72 |
17 | IMID 2 | −8.61 | 0.34 | 0.28 |
6 | INDZ | −7.96 | Ref. | Ref. |
12 | IMID 1 | −8.14 | 0.26 | 1.08 |
18 | IMID 2 | −8.95 | 0.67 | 1.42 |