TABLE 3.

Comparison of fungal genus in different vegetable rotations and continuous tomato cropping substrates (t-test).

Genus	log2FC	p-value
	B/CK	(*p < 0.05)
Cladosporium	1.17	0.0495*
Pseudogymnoascus	–7.36	0.0495*
Verticillium	5.52	0.0495*
Microascaceae_unclassified	–1.28	0.0495*
Gibberella	–2.05	0.0495*
Chaetomiaceae_unclassified	–0.64	0.0495*
Ascomycota_unclassified	–3.36	0.0495*
Pyrenochaeta	–2.58	0.0495*
Acremonium	–0.74	0.0495*
Sarocladium	1.09	0.0495*
Fusarium	–2.21	0.0495*
Davidiella	0.88	0.0495*
Emericellopsis	–1.31	0.0495*
Sordariomycetes_unclassified	–1.84	0.0495*
Scopulariopsis	–2.09	0.0495*
Hypocreales_Incertae_sedis_unclassified	1.36	0.0495*
Genus	log2FC	p-value
	D/CK	(*p < 0.05)
Cladosporium	1.34	0.0495*
Plectosphaerella	–3.08	0.0495*
Pseudogymnoascus	–2.01	0.0495*
Microascaceae_unclassified	–1.02	0.0495*
Gibberella	–1.24	0.0495*
Ascomycota_unclassified	–3.16	0.0495*
Humicola	5.55	0.0495*
Pyrenochaeta	–4.04	0.0495*
Emericellopsis	–1.48	0.0495*
Sordariomycetes_unclassified	–2.27	0.0495*
Scopulariopsis	–1.94	0.0495*
Hypocreales_Incertae_sedis_unclassified	2.61	0.0495*
Genus	log2FC	p-value
	Q/CK	(*p < 0.05)
Pseudogymnoascus	–4.33	0.0495*
Gibberella	–0.77	0.0495*
Ascomycota_unclassified	–2.57	0.0495*
Mortierella	1.34	0.0495*
Humicola	3.12	0.0495*
Pyrenochaeta	–1.08	0.0495*
Sarocladium	2.19	0.0495*
Hypocreales_Incertae_sedis_unclassified	4	0.0495*

*Significant at the 0.05 probability level. B, D, Q, and CK are defined in Figure 1. FC in log₂ FC is fold change, which represents the ratio of the expression amount between two samples (groups). After taking the logarithm based on 2, it is log₂ FC.