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Whole-genome dot plot comparison of prophage nucleotides sequences of Salmonella. Prophage genomes (n = 142 phage) were concatenated into a single sequence with a total length of 7,260,982 bp, which plots against itself with a sliding window of 10 bp and visualized by Genome Pair Rapid Dotter (Gepard) 1.40 version. A total of 90 prophage genomes were assigned to 17 groups a - q, and the remaining 52 prophage genomes plotted as singletons
