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. 2020 May 19;5(3):e00148-20. doi: 10.1128/mSystems.00148-20

TABLE 1.

Demographic and genomic characteristics of the isolates

Sample code Accession no. Age (yr) Gender Referring hospital ESBL Species No. of contigs Size (Mb) % G+C No. of RNAs No. of tRNAs No. of coding sequences N50 L50 Coverage (×) No. of CRISPR arrays
CF003 NXKE00000000 25 F Tshwane Academic + C. freundii 235 5.1 51.8 120 79 4,873 250,864 7 99 0
CF004 NXKF00000000 34 M Tshwane Academic C. freundii 100 4.9 51.7 85 64 4,576 250,864 7 102 0
EC001 NXIK00000000 42 M Tshwane Academic + E. hormaechei 169 5.0 54.9 101 71 4,762 190,180 8 94 0
EC009 NXIL00000000 51 F Tshwane Academic + E. hormaechei 446 4.9 55.1 110 73 4,620 208,827 7 95 0
EC010 NXIM00000000 61 M Tshwane Academic + E. hormaechei 757 5.0 55.1 107 73 4,763 203,535 8 98 0
EC015 NXJF00000000 18 M Tshwane Academic + E. hormaechei 113 4.9 50.6 72 56 4,604 344,169 6 96 0
K001 NXJG00000000 32 F Tshwane Academic + K. variicola 403 6.0 57.0 75 56 5,913 105,256 18 90 1
K006 NXJH00000000 27 F Tshwane Academic + E. hormaechei 260 5.0 56.0 79 68 4,824 861,27 37 92 0
K130 NXKO00000000       + E. hormaechei 109 5.1 54.8 74 59 4,801 190,037 9 90 0
K063 NXJN00000000 41 M Tshwane Academic + E. hormaechei 223 5.2 55.9 102 78 4,951 60,240 55 90 2
PM005 NXKC00000000 29 M Tshwane Academic + P. alcalifaciens 96 4.0 39.2 72 60 3,542 193,947 8 102 0