Table 4.
Amino acids constituting an odorant and copper-binding site in OR2M3
TMH segmenta | AA position within TMH segmenta | Mutagenesis-validated 3-Mercapto-2-methyl-pentan-1-ol binding site positions | 3-Mercapto-2-methyl-pentan-1-ol | Copper | 3-Mercapto-2-methyl-pentan-1-ol and copper | Validated positions in other ORs |
---|---|---|---|---|---|---|
TMH 3 | 8 | b,cThr1053.33 | H-bond | Indirect | H-bond | His1053.33: [30], His1083.33: [31], Ile1053.33: [64], Met1053.33: [9], His1083.33: [106], Cys1063.33: [50, 98] |
TMH 3 | 21 | Met1183.46 | No interaction | Direct | Direct | Met1153.46: [31] |
TMH 5 | 5 | cCys2025.41 | H-bond | Direct | H-bond via copper | Asn2025.41: [30], Thr2025.41: [9], Asn2025.41: [97], Thr2055.41: [95] |
TMH 5 | 6 | bCys2035.42 | No interaction | Direct | H-bond via copper | Thr2035.42: [97], Val2065.42: [107], Phe2075.42: [95] |
TMH 6 | 1 | cCys2416.33 | Indirect | Direct | Direct | Cys2386.33: [31] |
TMH 6 | 4 | His2446.36 | No interaction | Direct | Direct | His2416.36: [31] |