TABLE 1.
Summarized genomic features of nine alga-associated heterotrophic proteobacteria isolated from the cultivable phycosphere microbiota of toxic Alexandrium catenella LZT09
| Strain name | Genome length (bp) | G+C (mol%) | No. of genes | No. of reads | Coverage (×) | No. of contigs | N50 (bp) | Assembler | SRA accession no. | GenBank accession no. | No. of tRNAs | No. of rRNAs | No. of ncRNAsa |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Limnobacter sp. LZ-4 | 3,488,419 | 52.5 | 3,298 | 8,534,482 | 422 | 17 | 452,966 | SPAdes v3.5.0 | SRR11279520 | SWKN00000000 | 3 | 39 | 4 |
| Saccharospirillum alexandrii LZ-5T | 4,712,158 | 56.4 | 4,222 | 10,915,266 | 326 | 29 | 1,318,875 | SOAPdenovo v2.04 | SRR11267958 | RCIP00000000 | 3 | 53 | 4 |
| Marinobacter sp. LZ-8 | 4,337,754 | 57.4 | 3,998 | 9,344,736 | 312 | 20 | 882,613 | SPAdes v3.5.0 | SRR11300914 | SWKM00000000 | 4 | 49 | 4 |
| Ponticoccus sp. LZ-14 | 4,615,538 | 63.3 | 4,576 | 12,561,168 | 408 | 111 | 1,271,123 | SOAPdenovo v2.04 | SRR11268417 | RBVZ00000000 | 3 | 40 | 3 |
| Marivita sp. LZ-15-2 | 4,829,700 | 59.2 | 4,745 | 9,197,832 | 263 | 65 | 380,371 | SPAdes v3.5.0 | SRR11267608 | SWKO00000000 | 6 | 42 | 3 |
| Maricaulis sp. LZ-16-1 | 3,348,699 | 63.6 | 3,210 | 10,744,348 | 461 | 12 | 558,629 | SPAdes v3.5.0 | SRR11266721 | SWKP00000000 | 3 | 43 | 4 |
| Haliea alexandrii LZ-16-2T | 3,961,381 | 61.3 | 3,606 | 10,318,956 | 367 | 12 | 905,050 | SOAPdenovo v2.04 | SRR11278742 | RFLW00000000 | 3 | 41 | 4 |
| Maritimibacter sp. LZ-17 | 4,309,600 | 64.3 | 4,269 | 10,762,194 | 375 | 21 | 937,164 | SPAdes v3.5.0 | SRR11266783 | SWKQ00000000 | 3 | 41 | 3 |
| Mameliella sp. LZ-28 | 5,663,795 | 64.9 | 5,548 | 14,028,028 | 372 | 38 | 326,544 | SPAdes v3.5.0 | SRR11285606 | JAANYX000000000 | 8 | 50 | 3 |
a
ncRNAs, noncoding RNAs.