Table 2.

Summary of RNA-seq sequencing and mapping statistics, Germ-free yeast-exposed (GFY 1–4), Germ-free control (GFC 1–4), conventionally-raised yeast-exposed (CRY 1–3) and conventionally-raised control (CRC 1–4).

Groups	Sample Name	Raw reads	Trimmed reads	Mapped reads
GFY	GFY1	24669117	24048794	21938786
	GFY2	37114905	36815478	33370813
	GFY3	21328279	20761050	18698371
	GFY4	31457716	31402738	28591929
GFC	GFC1	52777971	52741317	47873587
	GFC2	44926999	43756660	40008298
	GFC3	48821732	47864789	43618137
	GFC4	31078486	27438703	24860054
CRY	CRY1	19547159	19016863	17297348
	CRY2	20919983	20764342	18831659
	CRY3	18521634	18291999	17010316
CRC	CRC1	48588243	48529870	44062230
	CRC2	21689356	21011187	19126449
	CRC3	24736302	24621065	22202107
	CRC4	39589730	39389063	35532867
Total		485767612	476453918	433022951
		Minimum	Maximum	Total
	Raw reads	18521634	52777971	485767612
	Trimmed reads	18291999	52741317	476453918
	Mapped reads	17010316	47873587	433022951