Table 1.
The Details of the Representative A. Caviae Strains Downloaded from Genbank
| Isolate | Access Number | Country | Samples | Resistance Genesa |
|---|---|---|---|---|
| GSH8M-1 chromosomes and plasmids genome | AP019195.1 | Japan | Wastewater | blaMOX-12, blaOXA-780, mcr-3.18, blaOXA-669, aac(6′)‐Ia, aadA2, sul1, blaKPC-2, mph(A) |
| WCW1-2 chromosomes genome | CP039832.1 | People's Republic of China |
Sewage | blaMOX-5, blaOXA-427, catB3, cmlA1, floR, aac(6ʹ)-Ib-cr, qnrVC4, sul1, aac(6ʹ)-Ib3, aadA1, aph(3ʹ’)-Ib, aph(3ʹ)-Ia, aph(6)-Id, dfrA14, dfrB4, blaOXA-10, tet(X4) |
| T25-39 chromosomes genome | CP025706 | People's Republic of China |
Wastewater | blaMOX-6, blaOXA-427 |
| R25-2 chromosomes genome | CP025777.1 | People's Republic of China |
Wastewater | blaMOX-6, blaOXA-427, aph(3ʹ’)-Ib, aph(6)-Id, tet(31), sul2, floR |
| NCTC12244 Chromosomes genome | LS483441.1 | UK | N | blaMOX-6, blaOXA-427 |
| Draft genome ZJ17-2 | NXBR00000000.1 | People's Republic of China |
River water | blaMOX-6, blaOXA-427, mcr-3, cat, tet(A), aadA1, sul1 |
| Draft genome A23 | LFXO00000000.1 | People's Republic of China |
Chicken sample | blaMOX-6, blaOXA-427, catB3, mph(A), blaOXA-2, blaPER-3, aadA1b, aadA16, ac(6ʹ)-Ib-Hangzhou, aac(6ʹ)-Ib-cr, sul1 |
| Draft genome ZJ33-3 | NXBW00000000.1 | People's Republic of China |
Human rectal swab | blaMOX-6, blaOXA-427, tet(A), mcr-3, cat, aadA1, sul1 |
| Draft genome AK245 | JAAALU000000000.1 | USA | Lake water | blaMOX-6 |
| Draft genome Sch29 | CAAKNG000000000.1 | UK | Gastroenteritis samples | blaMOX-4, blaOXA-427, |
| Draft genome L12 | JWJP00000000.1 | Malaysia | Lake water | blaMOX-5, mcr-3.15 |
| Draft genome TCO22 | NMSG00000000.1 | USA | Gut samples | blaMOX-6, blaOXA-427, tetE, mcr3.12, mcr-3.15, aph(3ʹ)-Ia, mph(A) |
| Draft genome strain D | VZQB00000000.1 | South Africa | Seawater | blaMOX-6, blaOXA-427, |
| Draft genome strain CH129 | MDSD00000000.1 | Brazi | Seawater | blaMOX-6 |
| Draft genome strain CHZ306 | MDSC00000000.1 | Brazi | Seawater | blaMOX-6, blaOXA-427, tetE |
| Draft genome strain ScAc2001 | WUTZ00000000.1 (In this study) | People's Republic of China |
Human sample | blaMOX-6, blaOXA-427, aac(6ʹ)-Ib3, aadA1, blaOXA-10, catB3, sul1, mcr-3, dfrA5, blaCTX-M-14, blaKPC-2, blaTEM-150, blaVEB-3 |
Notes: aThe resistance genes were identified by the ResFinder (https://cge.cbs.dtu.dk/services/ResFinder/) (minimum threshold for identity, 80%; minimum coverage, 60%).
Abbreviations: N, Not shown.