Table 5.
Overall Features of the Aeromonas caviae SCAc2001 Genomic Islands and Prophages
| Genomic Islands and Prophages | Location (Start-End) | Length (bp) | G+C% | Closest Match in Genbank (Query Cover and Identity) | |
|---|---|---|---|---|---|
| Genomic islands | GI_SCAc2001–1 | Scaffold26 (22,433–29,614) | 7182 | 54.58 | Aeromonas sp. ASNIH7 chromosome genome (74%,91.04%) |
| GI_SCAc2001–2 | Scaffold42 (14,540–21,489) | 6950 | 63.42 | Aeromonassp. ASNIH3 chromosome genome (100, 99.07%) | |
| GI_SCAc2001–3 | Scaffold57 (7135–15,483) | 8349 | 62.27 | Aeromonas caviaeFDAARGOS_72 genome (98%, 99.19%) | |
| GI_SCAc2001–4 | Scaffold5 (42,875–50,049) | 7175 | 62.45 | Aeromonas caviaeWCW1-2 genome (100%, 98.27%) | |
| Prophages | Pp_SCAc2001–1 | Scaffold159 4884–7973 | 3090 | 58.93 | plasmid pMCR5_045096 (100%, 100%) |
| Pp_SCAc2001–2 | Scaffold158 413–7151 | 6739 | 63.6 | Aeromonassp. ASNIH2 chromosome genome (100%, 99.6%) | |
| Pp_SCAc2001–3 | Scaffold209 146–2968 | 2823 | 61.18 | Aeromonas caviaeGSH8M-1 genome (100%, 98.87%) | |
| Pp_SCAc2001–4 | Scaffold38 8991–27,083 | 18,093 | 65.37 | Aeromonas sp. ASNIH2 chromosome genome (98%, 97.62%) | |
| Pp_SCAc2001–5 | Scaffold202 221–4124 | 3904 | 61.94 | Aeromonas caviae strain R25-6 genome (100%, 99%) | |
| Pp_SCAc2001–6 | Scaffold201 95–3149 | 3055 | 46.94 | Aeromonas media WS genome (98%, 99.87%) | |
| Pp_SCAc2001–7 | Scaffold128 236–10,450 | 10,215 | 63.55 | Aeromonas caviae FDAARGOS_72 genome (100%, 98.47%) | |
| Pp_SCAc2001–8 | Scaffold129 479–4423 | 3945 | 58.93 | Aeromonas hydrophila strain WCHAH045096 chromosome genome (80%, 94.6%) | |