Table 4. Comparison of TLR polymorphisms between Chinese egret and other avian species.
| Species | Genes | N | SNPs | h | π | Reference |
|---|---|---|---|---|---|---|
| Chinese egret (Egretta eulophotes) a | TLR1LB | 10 | 1 | 2 | 0.0004 | This study |
| TLR2A | 10 | 7 | 4 | 0.0033 | ||
| TLR3 | 10 | 3 | 3 | 0.0017 | ||
| TLR4 | 10 | 1 | 2 | 0.0007 | ||
| TLR5 | 10 | 2 | 2 | 0.0009 | ||
| TLR7 | 10 | 1 | 2 | 0.0004 | ||
| TLR15 | 10 | 3 | 3 | 0.0011 | ||
| Little egret (Egretta garzetta) b | TLR1LB | 10 | 6 | 7 | 0.0034 | This study |
| TLR2A | 10 | 10 | 6 | 0.0044 | ||
| TLR3 | 10 | 5 | 4 | 0.0017 | ||
| TLR4 | 10 | 1 | 2 | 0.0007 | ||
| TLR5 | 10 | 3 | 4 | 0.0006 | ||
| TLR7 | 10 | 2 | 3 | 0.0006 | ||
| TLR15 | 10 | 7 | 8 | 0.0036 | ||
| White-winged flufftail (Sarothrura ayresi) | TLR1LB | 10 | 5 | 5 | 0.0014 | Dalton et al., 2016 |
| TLR2A | - | - | - | - | ||
| TLR3 | 10 | 1 | 2 | 0.0004 | ||
| TLR4 | 10 | 0 | 1 | 0.0000 | ||
| TLR5 | - | - | - | - | ||
| TLR7 | 10 | 4 | 5 | 0.0011 | ||
| TLR15 | - | - | - | - | ||
| African penguin (Spheniscus demersus) | TLR1LB | 10 | 2 | 3 | 0.0005 | Dalton et al., 2016 |
| TLR2A | 10 | 4 | 3 | 0.0020 | ||
| TLR3 | - | - | - | - | ||
| TLR4 | - | - | - | - | ||
| TLR5 | 10 | 1 | 2 | 0.0002 | ||
| TLR7 | - | - | - | - | ||
| TLR15 | - | - | - | - | ||
| New Zealand robin (Petroica australis rakiura) | TLR1LB | 10 | 3 | 2 | 0.0016 | Grueber et al., 2012 |
| TLR2A | 10 | 1 | 2 | 0.0005 | ||
| TLR3 | 9 | 0 | 1 | 0.0000 | ||
| TLR4 | 10 | 4 | 5 | 0.0027 | ||
| TLR5 | 10 | 2 | 3 | 0.0005 | ||
| TLR7 | 10 | 3 | ≥ 2 | N/A | ||
| TLR15 | 10 | 1 | 2 | 0.0000 | ||
| Lesser kestrel (Falco naumanni) | TLR1LB | 8 | 16 | 15 | 0.0039 | Alcaide and Edwards, 2011 |
| TLR2A | 8 | 6 | 5 | 0.0040 | ||
| TLR3 | 8 | 1 | 2 | 0.0009 | ||
| TLR4 | 8 | 6 | 7 | 0.0030 | ||
| TLR5 | 8 | 20 | 16 | 0.0043 | ||
| TLR7 | 8 | 3 | 4 | 0.0017 | ||
| TLR15 | 8 | 43 | 14 | 0.0100 | ||
| House finch (Carpodacus mexicanus) | TLR1LB | 8 | 25 | 20 | 0.0067 | Alcaide and Edwards, 2011 |
| TLR2A | 8 | 13 | 8 | 0.0067 | ||
| TLR3 | 8 | 11 | 9 | 0.0038 | ||
| TLR4 | 8 | 16 | 14 | 0.0049 | ||
| TLR5 | 8 | 2 | 3 | 0.0001 | ||
| TLR7 | 8 | 27 | 15 | 0.0077 | ||
| TLR15 | 8 | 35 | 16 | 0.0082 |
a 10 samples were randomly sampled from 120 samples three times, and the average value was obtained.
b 10 samples were randomly sampled from 20 samples three times, and the average value was obtained.
N Number of samples, h the number of haplotypes, π mean nucleotide diversity.