Table 3.
wCer2 Genome |
wAu |
wMel |
wRec |
wVitA |
wHa |
wRi |
wSuz |
wNo |
wPip |
||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Host | Drosophila simulans DsimRC50 | Drosophila simulans DsimRC45 | Ceratitis capitata Ccap88.6 | Rhagoletis cerasi RcerAS | Drosophila simulans | Drosophila melanogaster | Drosophila recens | Nasonia vitripennis | Drosophila simulans | Drosophila simulans | Drosophila suzukii | Drosophila simulans | Culex quinquefasciatus |
Assembly | De novo | Resequenced | Resequenced | Resequenced | — | — | — | — | — | — | — | — | — |
Genome size (bp) | 1,325,568 | 1,325,566 | 1,325,566 | 1,325,563 | 1,268,461 | 1,267,782 | 1,126,656 | 1,211,929 | 1,295,804 | 1,445,873 | 1,415,350 | 1,301,823 | 1,482,455 |
Number of contigs | 11 | 11 | 11 | 11 | 1 | 1 | 43 | 142 | 1 | 1 | 110 | 1 | 1 |
G+C content (%) | 35.18 | 35.18 | 35.18 | 35.18 | 35.22 | 35.23 | 35.17 | 34.9 | 35.09 | 35.16 | 35.21 | 34.01 | 34.19 |
Predicted CDSs | 1,259 | 1,261 | 1,260 | 1,262 | 1,276 | 1,271 | 1,111 | 1,097 | 1,235 | 1,396 | 1,321 | 1,220 | 1,410 |
Coding density (%) | 84.1 | 84.1 | 84.1 | 84.1 | 84.3 | 84 | 83.4 | 85.1 | 84.2 | 84.6 | 82.6 | 87 | 87.2 |
Average gene size (bp) | 885 | 884 | 884 | 883 | 838 | 838 | 845 | 941 | 883 | 876 | 885 | 928 | 917 |
Transfer RNAs | 34 | 34 | 34 | 34 | 34 | 34 | 34 | 34 | 34 | 34 | 34 | 34 | 34 |
Ribosomal RNAs | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each | 1 of each |
Pseudogenes | 33 | 33 | 33 | 33 | 53 | 39 | 32 | 17 | 36 | 64 | 32 | 19 | 42 |