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. 2020 May 27;8:e9158. doi: 10.7717/peerj.9158

Table 3. Genomic features of the Brasilonema spp. strains characterized in this work.

Feature UFV-E1 CENA114 UFV-OR1 SPC 951 UFV-L1
completeness (%) 99.52 100.00 99.28 90.48 99.40
contamination (%) 2.89 2.17 3.01 2.37 1.20
total size (bp) 8,258,380 8,226,398 8,094,337 6,277,767 8,321,598
–chromosome 7,816,330 7,782,641
–plasmid 1 251,877 252,036
–plasmid 2 190,173 191,721
coding sequences (bp) 6,559,505 6,529,766 6,271,238 4,742,865 6,443,634
–chromosome 6,198,811 6,170,908
–plasmid 1 204,544 204,193
–plasmid 2 156,150 154,665
GC content (%) 42.49 42.50 42.48 42.97 41.97
genes 6,950 6,929 6,908 5,693 7,214
protein-coding genes 6,395 6,371 6,309 5,207 6,652
pseudogenes 497 502 541 432 516
RNA genes 58 56 58 54 46
ncRNA 4 4 4 4 4
genes with assigned subsystems 1,394 1,388 1,427 1,137 1,397
genes assigned to COG categories with known function 3,440 3,426 3,379 2,741 3,389
hypothetical proteins 2,081 2,092 2,074 1,695 2,314