Skip to main content
. 2020 Apr 20;48(10):5735–5748. doi: 10.1093/nar/gkaa246

Table 1.

Data collection, image processing and refinement statistics

Data collection
Sample support Quantifoil R1.2/1.3 200 mesh copper
Microscope Titan Krios
Detector K2 Summit post Quantum GIF
Voltage (kV) 300
Pixel size (Å) 1.06
Box size (pix) 140
No. movie frames 38
Exposure time (s) 7.6
Electron dose (e/ Å2) 50
No. of micrographs recorded/used 2608/1196
Reconstruction
Software RELION
No. of particles picked/used 227 552/63 968
Symmetry C1
Final Resolution (Å) 3.9
B factor (Å2) 168
Accuracy of rotations (o) 2.31
Accuracy of translations (pix) 0.71
Refinement
Software Phenix
Map-sharpening B factor (Å2) 168
Model Composition
Non-hydrogen atoms 11 104
Protein residues 729
DNA base pairs 130
Average B factor (Å2) 38.2
Correlation coefficient (around atoms) 0.774
R.m.s. deviations
Bond lengths (Å) 0.010
Bond angles (o) 1.09
Ramachandran plot statistics (%)
Favored 93.3
Allowed 6.7
Outlier 0
Molprobity analysis
All-atom clashscore 3.93
Overall score 1.62
Rotamer outliers (%) 0
Cβ outliers (%) 0
EMRinger score 2.47