Table 1:
Disease Category | ICD Category | # of codes (# w/ PheCode) | Roll-up | KpheWAS | KmvBSC | NMI | ARI | F1 |
---|---|---|---|---|---|---|---|---|
(1) Certain infectious and parasitic diseases | A00–B99 | 849 (828) | 0 | 77 | 180 | 0.74 | 0.22 | 0.27 |
1 | 70 | 58 | 0.70 | 0.40 | 0.44 | |||
2 | 34 | 44 | 0.70 | 0.51 | 0.54 | |||
(2) Malignant neoplasms | C00-C97 | 1081 (1081) | 0 | 83 | 86 | 0.87 | 0.49 | 0.52 |
1 | 70 | 70 | 0.89 | 0.58 | 0.61 | |||
2 | 34 | 28 | 0.84 | 0.68 | 0.71 | |||
(3) Blood and blood-forming organs and certain disorders involving the immune mechanism | D50–D89 | 243 (241) | 0 | 66 | 68 | 0.85 | 0.45 | 0.56 |
1 | 49 | 48 | 0.84 | 0.54 | 0.61 | |||
2 | 22 | 13 | 0.73 | 0.65 | 0.69 | |||
(4) Mental and behavioral disorders | F00–F99 | 843 (840) | 0 | 62 | 132 | 0.73 | 0.17 | 0.20 |
1 | 53 | 22 | 0.73 | 0.62 | 0.67 | |||
2 | 24 | 21 | 0.73 | 0.66 | 0.72 | |||
(5) Nervous system | G00–G99 | 748 (748) | 0 | 89 | 124 | 0.82 | 0.38 | 0.43 |
1 | 80 | 64 | 0.86 | 0.62 | 0.65 | |||
2 | 48 | 39 | 0.87 | 0.71 | 0.73 | |||
(6) Eye and adnexa | H00–H59 | 1096 (1092) | 0 | 100 | 100 | 0.79 | 0.44 | 0.48 |
1 | 85 | 58 | 0.81 | 0.51 | 0.54 | |||
2 | 30 | 36 | 0.80 | 0.64 | 0.66 | |||
(7) Ear and mastoid process | H60–H95 | 458 (452) | 0 | 31 | 36 | 0.76 | 0.58 | 0.62 |
1 | 29 | 22 | 0.76 | 0.67 | 0.70 | |||
2 | 14 | 6 | 0.75 | 0.62 | 0.69 | |||
(8)Circulatory diseases | I00–I25 | 208 (182) | 0 | 26 | 28 | 0.80 | 0.50 | 0.56 |
1 | 22 | 14 | 0.81 | 0.68 | 0.73 | |||
2 | 8 | 4 | 0.89 | 0.92 | 0.95 | |||
(9) Digestive system | K00–K93 | 827 (782) | 0 | 149 | 148 | 0.84 | 0.48 | 0.53 |
1 | 131 | 79 | 0.85 | 0.58 | 0.62 | |||
2 | 56 | 38 | 0.85 | 0.74 | 0.76 | |||
(10) Skin and subcutaneous tissue | L00–L99 | 738 (738) | 0 | 84 | 145 | 0.77 | 0.47 | 0.50 |
1 | 77 | 120 | 0.78 | 0.72 | 0.74 | |||
2 | 38 | 84 | 0.70 | 0.53 | 0.58 | |||
(11) Arthropathies | M00–M25 | 1374 (1369) | 0 | 59 | 114 | 0.83 | 0.43 | 0.45 |
1 | 52 | 62 | 0.82 | 0.51 | 0.53 | |||
2 | 18 | 16 | 0.79 | 0.65 | 0.70 | |||
(12) Genitourinary system | N00–N99 | 685 (676) | 0 | 149 | 155 | 0.84 | 0.38 | 0.46 |
1 | 118 | 70 | 0.84 | 0.45 | 0.50 | |||
2 | 51 | 69 | 0.81 | 0.44 | 0.48 | |||
(13) Pregnancy, childbirth and the puerperium | O00–O99 | 608 (603) | 0 | 52 | 128 | 0.78 | 0.33 | 0.39 |
1 | 52 | 66 | 0.79 | 0.45 | 0.50 | |||
2 | 39 | 64 | 0.77 | 0.42 | 0.47 |