Table 2.

Statistics of reads in the C.formicarius transcriptomes

Item	Eggs	L2	L3	Pupae	Females	Males
Total raw reads	3,506,028	3,628,506	3,691,650	3,515,889	3,675,722	3,655,575
Clean reads	3,440,924	3,575,823	3,641,125	3,441,973	3,606,789	3,589,984
Distinct Tag	51,585	42,343	41,807	57,638	53,008	52,399
Tags mapping to gene	3,112,632	3,315,991	3,395,530	3,147,847	3,270,395	3,259,878
Clean tag mapping to gene (%)	90.46	92.73	93.25	91.45	90.67	90.80
Distinct tag mapping to gene	36,209	30,638	29,311	40,437	36,318	35,537
All Tag-mapped Genes	26,822	25,104	25,125	28,715	27,477	27,469
Tag-mapped Genes (%)	43.48	40.70	40.73	46.55	44.55	44.53