Table 1.
MADS-box genes in Averrhoa carambola, Arabidopsis thaliana, Cephalotus follicularis and Theobroma cacao.
| Category | A. carambola | A. thaliana21 | C. follicularis14 | T. cacao22,23 | ||||
|---|---|---|---|---|---|---|---|---|
| Functional | Pseudo | Functional | Pseudo | Functional | Pseudo | Functional | Pseudo | |
| Type II (Total) | 48a | 45 | 27 | 68 | ||||
| MIKCc | 43 | 39 | 24 | 58 | ||||
| A | 3 | 4 | 3 | 7 | ||||
| AGL12 | 1 | 1 | 1 | 1 | ||||
| C/D | 3 | 4 | 3 | 10 | ||||
| SOC1 | 3 | 6 | 3 | 7 | ||||
| SVP | 15 | 2 | 2 | 4 | ||||
| ANR1 | 5 | 4 | 2 | 3 | ||||
| Bs | 1 | 2 | 1 | 4 | ||||
| B-PI | 1 | 1 | 1 | 1 | ||||
| B-AP3 | 2 | 1 | 2 | 5 | ||||
| AGL6 | 2 | 2 | 1 | 5 | ||||
| E | 4 | 4 | 3 | 6 | ||||
| FLC | 1 | 6 | 0 | 3 | ||||
| AGL15 | 2 | 2 | 2 | 2 | ||||
| MIKCa | 5 | 6 | 3 | 10 | 2 | |||
| Type I (Total) | 28 | 2 | 61 | 24 | 28 | |||
| Mα | 20 | 25 | 15 | 8 | 3 | |||
| Mβ | 2 | 2 | 20 | 5 | 2 | 2 | 1 | |
| Mγ | 4 | 16 | 4 | 13 | 1 | |||
| Total | 74 | 2 | 106 | 51 | 2 | 91 | 7 | |
aThe number of MADS-box genes identified in this study. Genes with a stop codon in the MADS-box domain were categorized as pseudogenes.