TABLE 2.
Oxford Nanopore library preparation and sequencing statistics. Non-fragmentation and fragmentation techniques were used in sample preparation.
| Library | Fragmentation | Total length (Gb) | Totals reads | N50 (bp) | Mean length (bp) | Median length (bp) | Max length (bp) | Mean quality score |
| 1 | No Fragmentation | 1.26 | 55,551 | 40,434 | 22,617 | 15,607 | 194,834 | 9.1 |
| 2 | Zymo | 5.61 | 567,514 | 23,595 | 9,877 | 4,522 | 153,389 | 9.4 |
| 3 | Zymo | 2.24 | 133,660 | 33,394 | 16,770 | 9,857 | 199,575 | 9.2 |
| 4 | Covaris, 4,200 RPM | 13.04 | 1,005,270 | 15,878 | 11,760 | 11,017 | 181,817 | 8.3 |
| 5 | Covaris, 3,800 RPM | 10.08 | 854,994 | 15,277 | 11,788 | 11,104 | 133,274 | 9.1 |
| 6 | Covaris, 3,800 RPM | 6.94 | 501,526 | 20,681 | 13,760 | 12,431 | 164,726 | 8.9 |
| 7 | Covaris, 4,200 RPM | 8.86 | 617,385 | 19,276 | 14,343 | 12,932 | 231,794 | 9.1 |
| 8 | Covaris, 4,200 RPM | 10.72 | 1,221,530 | 12,664 | 8,778 | 8,300 | 149,453 | 9.1 |
| 9 | Covaris, 4,000 RPM | 6.64 | 568,017 | 17,580 | 11,686 | 11,115 | 128,743 | 8.9 |
| Avg/Total | 65.4 | 5,525,447 | 22,087 | 13,487 | 10,765 | 170,845 | 9 |