TABLE 6.
Orthologous genes were identified between A. hortensis and beet (A), C. quinoa (B) and Am. hypochondriacus (C) to detect orthologous chromosome relationships.
| Ah1 | Ah2 | Ah3 | Ah4 | Ah5 | Ah6 | Ah7 | Ah8 | Ah9 | Total synteny spanned (bp) | |
| (A) | ||||||||||
| Bv5 | 75,985,214 | 75,985,214 | ||||||||
| Bv4 | 76,231,045 | 205,876 | 76,436,921 | |||||||
| Bv6 | 32,474,644 | 38,024,142 | 1,018,214 | 71,517,000 | ||||||
| Bv8 | 1,043,269 | 59,005,657 | 60,048,926 | |||||||
| Bv3 | 76,200,679 | 76,200,679 | ||||||||
| Bv1 | 35,497,946 | 24,584,006 | 60,081,952 | |||||||
| Bv7 | 68,960,315 | 68,960,315 | ||||||||
| Bv2 | 65,798,714 | 65,798,714 | ||||||||
| Bv9 | 31,029,170 | 29,976,099 | 61,005,269 | |||||||
| (B) | ||||||||||
| Cq5A | 88,356,818 | 80,733 | 88,437,551 | |||||||
| Cq5B | 85,221,237 | 85,221,237 | ||||||||
| Cq4A | 78,889,108 | 678,948 | 79,568,056 | |||||||
| Cq4B | 74,788,751 | 265,848 | 75,054,599 | |||||||
| Cq6A | 34,880,745 | 45,906,343 | 80,787,088 | |||||||
| Cq6B | 30,549,711 | 43,708,464 | 74,258,175 | |||||||
| Cq8A | 844,472 | 63,922,236 | 73,334 | 64,840,042 | ||||||
| Cq8B | 844,472 | 68,256,659 | 69,101,131 | |||||||
| Cq3A | 72,931,389 | 1,972,202 | 74,903,591 | |||||||
| Cq3B | 73,061,839 | 73,061,839 | ||||||||
| Cq1A | 39,186,132 | 24,859,805 | 64,045,937 | |||||||
| Cq1B | 32,666,424 | 3,006,287 | 29,799,350 | 65,472,061 | ||||||
| Cq7A | 68,938,800 | 68,938,800 | ||||||||
| Cq7B | 12,915,209 | 60,375,606 | 2,102,719 | 75,393,534 | ||||||
| Cq2A | 68,395,255 | 68,395,255 | ||||||||
| Cq2B | 1,684,254 | 794,038 | 7,716,047 | 57,060,920 | 67,255,259 | |||||
| Cq9A | 34,390,946 | 29,902,118 | 64,293,064 | |||||||
| Cq9B | 21,296,635 | 10,957,411 | 27,531,165 | 59,785,211 | ||||||
| (C) | ||||||||||
| Am11 | 34,077,858 | 1,414,077 | 5,216,151 | 7,553,686 | 48,261,772 | |||||
| Am12 | 31,526,741 | 604,945 | 329,285 | 9,294,151 | 41,755,122 | |||||
| Am4 | 41,122,991 | 30,756,424 | 71,879,415 | |||||||
| Am6 | 46,411,045 | 46,411,045 | ||||||||
| Am1 | 47,400,936 | 31,083,078 | 78,484,014 | |||||||
| Am9 | 609,018 | 45,747,049 | 521,887 | 46,877,954 | ||||||
| Am14 | 41,664,113 | 41,664,113 | ||||||||
| Am13 | 44,814,461 | 44,814,461 | ||||||||
| Am7 | 6,842,070 | 17,248,169 | 1,330,917 | 25,421,156 | ||||||
| Am3 | 1,167,442 | 24,822,048 | 25,821,038 | 51,810,528 | ||||||
| Am5 | 25,008,790 | 12,043,145 | 37,051,935 | |||||||
| Am2 | 23,542,392 | 1,607,269 | 15,871,055 | 16,950,212 | 57,970,928 | |||||
| Am8 | 55,245,256 | 55,245,256 | ||||||||
| Am15 | 40,042,725 | 40,042,725 | ||||||||
| Am10 | 1,585,265 | 54,032 | 144,414 | 37233979 | 39,017,690 | |||||
| Am16 | 283,173 | 16935472 | 17,218,645 |
Total syntenic bases are shown between all chromosome comparisons. Syntenic relationships are colored red and transition to white as the amount of synteny decreases.