TABLE 1.
Overviews of trait-associated variants on the chr8q24 locus.
LincRNA | Trait-associated variants | Diseases | Position | References |
CASC8 | rs378854 | Adiposity | Intron | Ng et al., 2017 |
rs10505477 | Colorectal, gastric, and lung cancers | Intron | Ma et al., 2015; Hu et al., 2016 | |
CASC19 | rs138042437 | Prostate cancer | Intron | Teerlink et al., 2016 |
CCAT1 | rs6983267 | Colorectal cancer, endometrial carcinoma | Enhancer | Kim et al., 2014; Zhao et al., 2016 |
CCAT2 | rs6983267 | Prostate, breast, colon, and colorectal cancers; myeloid malignancies | Exon | Yeager et al., 2007; Tuupanen et al., 2009; Ling et al., 2013; Shah et al., 2018 |
PCAT1 | rs7463708 | Prostate cancer | Enhancer | Guo et al., 2016 |
rs10086908 | Prostate cancer | Promoter | Guo et al., 2016 | |
PRNCR1 | rs1456315, rs7463708 | Prostate cancer | Exon | Chung et al., 2011 |
rs13252298, rs1456315 | Colorectal cancer | Exon | Li et al., 2013 | |
rs183373024 | Prostate cancer | Exon | Teerlink et al., 2016 | |
PVT1 | rs13281615 | Breast cancer | Promoter | Zhang et al., 2014 |
rs2720709, rs2648875 | End-stage renal disease (ESRD) | Intron, intron | Hanson et al., 2007 | |
rs378854 | Prostate cancer | Promoter | Meyer et al., 2011 | |
rs13255292, rs4733601 | Diffuse large B cell lymphoma | Intron, downstream | Cerhan et al., 2014 |
LincRNA, long intergenic non-protein coding RNA.