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. 2020 May 25;8:347. doi: 10.3389/fcell.2020.00347

TABLE 3.

Some databases that may be used for driver identification.

Tools Functional annotation Link References
LincSNP 2.0 Store and annotate disease-associated SNVs in human lncRNAs and their transcription factor binding sites (TFBSs) http://bioinfo.hrbmu.edu.cn/LincSNP Ning et al., 2017
lncRNASNP2 Comprehensive information of SNVs and mutations in lncRNAs, as well as their impacts on lncRNA structure and function http://bioinfo.life.hust.edu.cn/lncRNASNP2 Miao et al., 2018
LncVar A database of genetic variation associated with long non-coding genes in six species http://bioinfo.ibp.ac.cn/LncVar Chen et al., 2017
The 1000 Genomes Project The largest public catalog of human variation and genotype data http://www.internationalgenome.org/ Genomes Project et al., 2015
dbSNP A public-domain archive for a broad collection of simple genetic polymorphisms https://www.ncbi.nlm.nih.gov/snp
GWAS Catalog A catalog that has provided data from published genome-wide association studies www.ebi.ac.uk/gwas/ MacArthur et al., 2017
GWAS4D A web server that systematically evaluates GWAS signals and identifies context-specific regulatory variants http://mulinlab.tmu.edu.cn/gwas4d Huang et al., 2018

SNVs, single-nucleotide variants; lncRNAs, long non-coding RNAs; GWAS, genome-wide association study.