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. 2020 May 25;11:1013. doi: 10.3389/fmicb.2020.01013

TABLE 4.

Top 5 most important features for each antibiotic model.

ARGC Gain
Cefepime
AAC(6′)-Ib family aminoglycoside 6′-N-acetyltransferase 18.90 ± 3.27
Class A extended-spectrum beta-lactamase CTX-M-222 7.84 ± 1.07
Aminoglycoside O-phosphotransferase APH(3″)-Ib 6.44 ± 1.91
Class C extended-spectrum beta-lactamase EC-18 5.49 ± 1.30
Carbapenem-hydrolyzing class A beta-lactamase KPC-33 5.14 ± 1.32
Cefotaxime
Aminoglycoside nucleotidyltransferase ANT(3″)-IIa 17.09 ± 7.27
AAC(6′)-Ib family aminoglycoside 6′-N-acetyltransferase 13.75 ± 7.65
Class C extended-spectrum beta-lactamase EC-18 13.16 ± 4.84
Multidrug efflux RND transporter permease subunit OqxB21 9.74 ± 4.27
OXA-51 family carbapenem-hydrolyzing class D beta-lactamase OXA-561 8.26 ± 3.86
Ceftriaxone
AAC(6′)-Ib family aminoglycoside 6′-N-acetyltransferase 15.52 ± 4.35
Class C beta-lactamase CMY-163 8.76 ± 1.79
Class A extended-spectrum beta-lactamase CTX-M-222 8.37 ± 2.17
Class C extended-spectrum beta-lactamase EC-18 8.10 ± 1.99
Multidrug efflux RND transporter permease subunit OqxB21 7.00 ± 3.20
Ciprofloxacin
AAC(6′)-Ib family aminoglycoside 6′-N-acetyltransferase 23.44 ± 4.94
Sulfonamide-resistant dihydropteroate synthase Sul1 10.29 ± 3.20
Tetracycline efflux MFS transporter Tet(B) 4.99 ± 1.71
Class A beta-lactamase TEM-219 4.93 ± 1.14
Aminoglycoside O-phosphotransferase APH(3″)-Ib 4.47 ± 1.63
Gentamicin
Aminoglycoside N-acetyltransferase AAC(3)-IIc 28.79 ± 3.10
ANT(3″)-Ia family aminoglycoside nucleotidyltransferase AadA1 20.98 ± 2.52
Aminoglycoside nucleotidyltransferase ANT(2”)-Ia 17.79 ± 2.03
OXA-24 family carbapenem-hydrolyzing class D beta-lactamase OXA-25 4.15 ± 1.59
Mph(E) family macrolide 2’-phosphotransferase 2.07 ± 1.10
Levofloxacin
AAC(6′)-Ib family aminoglycoside 6′-N-acetyltransferase 25.11 ± 6.17
Sulfonamide-resistant dihydropteroate synthase Sul1 7.72 ± 3.73
Tetracycline efflux MFS transporter Tet(B) 5.92 ± 1.67
Class A beta-lactamase TEM-219 5.89 ± 1.74
Class C extended-spectrum beta-lactamase EC-18 4.97 ± 1.73
Meropenem
Carbapenem-hydrolyzing class A beta-lactamase KPC-33 30.09 ± 5.21
Bleomycin binding protein Ble-MBL 9.55 ± 2.02
OXA-23 family carbapenem-hydrolyzing class D beta-lactamase OXA-483 8.58 ± 3.25
Class C extended-spectrum beta-lactamase EC-18 5.79 ± 2.05
Class A beta-lactamase SHV-200 5.59 ± 2.74
Tobramycin
AAC(6′)-Ib family aminoglycoside 6′-N-acetyltransferase 60.50 ± 5.02
Aminoglycoside nucleotidyltransferase ANT(2”)-Ia 17.91 ± 1.98
Aminoglycoside N-acetyltransferase AAC(3)-IIc 6.54 ± 1.24
Aminoglycoside 6′-N-acetyltransferase AAC(6′)-Iq 4.62 ± 1.51
ArmA family 16S rRNA [guanine(1405)-N(7)]-methyltransferase 1.89 ± 0.97

*Gain is the relative importance of the ARGC in a prediction model, reported here as mean with standard deviation computed over 51 independent models for the same AB.