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. 2020 May 29;43(2):e20190267. doi: 10.1590/1678-4685-GMB-2019-0267

Table 2. Characteristics (the 5’ end labeling fluorophores; F: the forward primer sequences; R: the reverse primer sequences; Ta: annealing temperature; sizes of the amplified fragments in base pairs-bp) of the microsatellites (SSRs) developed for Fusarium oxysporum f. sp. phaseoli isolates.

SSR/ fluorophores Primer sequences (5’-3’) Motifs Number of Alleles TA (°C) Sizes of the amplified Fragments (bp) PIC GenBank Accession number
FOP 01-B01 NED F – CCGCCGATTTCCTTACCT (AT)9 03 58 237-254 0.13 MK622886
R - GCACCCTTCAAACCTCCA
FOP 07-B01 PET F - TGAGCGAATGGGAAGAGG (GGAG)5 06 58 151-225 0.54 MK622887
R - TGCCAAGGGAGTATCATTTC
FOP 10-B01 PET F – ATGGGATAGGCGGTTTGG (TC)3/(AG)3 05 58 236-255 0.77 MK602310
R - ACTTGGGGTTGAGCGTTG
FOP 13-B01 6FAM F - TTCTTGCTGATCGCCTCA (GGCAT)5 02 59 152-167 0.37 MK602312
R - CCTCCCCTGCAATAAGAGC
FOP 15-B01 NED F - CCGTCTTCATCTTGGCGTCTA (AGAT)4 03 54 209-225 0.09 MK622888
R - TATCTAAGGGGTGGGACGGAG
FOP 16-B01 PET F - CCGCGCTCTCGAGCAGGG (ACT)3 02 54 202-205 0.35 MK602313
R - TGCCGAAGTAAAAGCACGG
FOP 20-B01 6-FAM F - CCGTTTGGCGCAAGTT (GA)6 10 54 148-188 0.70 MK622889
R - CGAGCGGCTTGTCTTCA
FOP 28-B01 PET F - GTTGCGCTCCCCAATATG (TC)3/(AT)3 02 56 204-208 0.09 MK622890
R - CCTCCATTGCCATCCATTT
FOP 35-B01 NED F - GGCTGGTGGTTTCAAGAGAG (CAC)6 06 58 210-236 0.40 MK622891
R – CAAGGCTTCTTCACGGGTAA
FOP 37-B01 NED F - GCAACACAGGAGGTGGTA (TGCT)3 04 54 180-192 0.29 MK622892
R - CAAGGGTATTGGTGCTTG
FOP 08-B02 6-FAM F - ACAGTGGCTCGTGACTCCA (CT)3(TA)3 06 59 222-240 0.38 MK602309
R - TGTTGGCACAGAGGCAGA
FOP 09-B02 NED F - TGCAGCGATGAGATTGGA (CCA)3 03 54 165-169 0.35 MK622893
R - GCGTCATCTCGTGAATCG
FOP 11-B02 VIC F - AACAGCCGAAGCCGATG (AG)7 07 59 259-305 0.62 MK602311
R - TTCACCTTCCACTTGCACA
FOP 18-B02 PET F - AATGCGGCCACTGTGATT (TCA)3/(ATC)2 04 59 151-164 0.33 MK602314
R - GCAGAAGTTGCGGTTGTG
FOP 23-B02 NED F - CAGGGGCACAGTTCGGTA (TC)3/(AT)3 04 59 190-196 0.35 MK622894
R - ATCGGCTGGGACATGAAG