Table 2. Identified repetitive elements in the Golden Promise assembly. Values represent percentage coverage of the genome.
| Golden Promise | MorexV1 | MorexV2 | |
|---|---|---|---|
| 72.88 | 70.65 | 74.93 | |
| Class I: Retroelement | |||
| LTR Retrotransposon | 63.16 | 62.25 | 64.25 |
| LTR/Copia | 19.87 | 21 | 20.94 |
| LTR/Gypsy | 42.97 | 40.93 | 42.99 |
| Unclassified LTR | 0.32 | 0.31 | 0.32 |
| Non-LTR Retrotransposon | |||
| LINE | 0.25 | 0.24 | 0.24 |
| SINE | 0.03 | 0.03 | 0.03 |
| Class II: DNA Transposon | |||
| DNA Transposon Superfamily | 8.25 | 7.39 | 8.97 |
| CACTA superfamily (DTC) | 7.77 | 6.92 | 8.49 |
| hAT superfamily (DTA) | 0.004 | 0.004 | 0.004 |
| Mutator superfamily (DTM) | 0.13 | 0.13 | 0.13 |
| Tc1/Mariner superfamily (DTT) | 0.2 | 0.19 | 0.2 |
| Harbinger superfamily (DTH) | 0.13 | 0.12 | 0.13 |
| Unclassified (DTX) | 0.02 | 0.02 | 0.02 |
| MITE (DXX) | 0.01 | 0.01 | 0.01 |
| Helitron (DHH) | 0.08 | 0.09 | 0.09 |
| Unclassified Element (XXX) | 0.46 | 0.3 | 0.74 |
| Simple Sequence Repeats | 0.63 | 0.36 | 0.59 |