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. 2020 Jun 1;128(6):067003. doi: 10.1289/EHP6174

Figure 2.

Figure 2 (A) is a five-set ellipse Venn diagram. Aircraft Lden equals 100, PM sub 2.5 equals 100, N O sub 2 equals 98, Road traffic Lden equals 98, and Railway Lden equals 100. The center equals 0. The overlapped region of NO sub 2 and Road traffic Lden equals 2, and the other overlapping regions equals 0. Figure 2 (B) is a five-set ellipse venn diagram. Aircraft Lden equals 8, PM sub 2.5 equals 55, NO sub 2 equals 6, Road traffic Lden equals 182, and Railway Lden equals 30. The center equals 0. The overlapped regions of NO sub 2 and Road traffic Lden, Road traffic Lden and Railway Lden, Railway Lden and Aircraft Lden, Aircraft Lden, Road traffic Lden, and PM sub 2.5, Road traffic Lden, and PM sub 2.5, Railway Lden and NO sub 2, and Railway Lden and PM sub 2.5 equals 1, 4, 1, 1, 1, 1, and 3, respectively, whereas the other regions equals 0.

Overlap of top 100 CpG signals (A) and genes annotated to significant differentially methylated regions (B) in relation to aircraft, railway, and road traffic Lden, NO2, and PM2.5 identified from multiexposure EWAS in the SAPALDIA study. Note: EWAS, epigenome-wide association study; Lden, day-evening-night noise level; NO2, nitrogen dioxide; PM2.5, particulate matter <2.5 microns in diameter; SAPALDIA, Swiss Cohort Study on Air Pollution and Lung and Heart Diseases in Adults. CpGs were identified by multiexposure EWAS using multivariable linear mixed-effects models with random intercepts at the level of participants, and adjusted for age, sex, educational level, area, neighborhood socioeconomic status, greenness index, smoking status, smoking pack-years, exposure to passive smoke, consumption of fruits, vegetables and alcohol, nested study, asthma status, noise truncation indicators, survey and leukocyte composition. In a preliminary step, DNA methylation β-values were regressed on the Illumina control probe-derived first 30 principal components to correct for correlation structures and technical bias, and residuals of these regressions covering 430,477 CpGs were used as the technical bias-corrected methylation level at the CpG sites. Extreme values of the residuals (lying beyond three times the interquartile range below the first quartile and above the third quartile at each CpG site) were replaced with their corresponding detection threshold value (“modified winsorization”). The “winsorized” data were then used as the dependent variables in the present EWAS. CpGs (annotated gene) intersecting at the level of road traffic Lden and NO2 were cg12439232 and cg15590912 (CCSAP). Genes (DMR) intersecting at the level of road traffic Lden and PM2.5 was PRRT1 (chr6:32,115,964–32,117,401); and at the level of aircraft and road traffic Lden and PM2.5 was HOXA2 (chr7:27,141,774–27,143,806). VTRNA2-1 (chr5:135,415,129–135,416,613) intersected between aircraft and railway Lden, ZFP57 (chr6:29,648,161–29,649,084), between railway Lden and NO2, and ZSCAN31 (chr6:28,303,923–28,304,451), between road traffic Lden and NO2. TRIM39, TRIM39-RPP21, and HCG18 (chr6:30,296,689–30,297,941) intersected between railway Lden and PM2.5, whereas SLC27A3 (chr1:153,746,588–153,747,856), B3GALT4 (chr6:33,244,976–33,246,185), EN2, and AC008060.8 (chr7:155,249,398–155,251,925) intersected between railway and road traffic Lden.