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[Preprint]. 2020 Feb 21:10.26434/chemrxiv.11875446.v1. [Version 1] doi: 10.26434/chemrxiv.11875446

Table 2: Ligand-residue MM-GBSA interaction energies (kcal/mol).

PubChem IDs are listed for the two bio-actives. The common hotspots for all the ligands are: HIS41, MET49, ASN142, HIS164, MET165, GLU166, and GLN189.

Residue ID Residue Type Co-crystal Ligand Neutral Approved Drug Charged Approved Drug Bioactive
DB08889 DB12329 DB00385 DB01601 DB11574 DB01082 DB03147 DB11184 23727975 88143175
24 THR −0.09 −0.15 −0.04 −0.04 −0.06 −0.93 −0.01 −0.10 −0.28 −0.08 −1.40
25 THR −1.51 −1.50 −0.15 −0.55 −1.56 −4.04 −0.10 −1.60 −3.18 −0.64 −3.68
26 THR −0.61 −0.90 −0.17 −0.21 −0.27 −6.19 −0.07 −3.08 −4.51 −0.17 −4.33
27 LEU −3.74 −1.24 −0.52 −1.03 −1.26 −2.20 −0.71 −2.60 −2.48 −0.25 −1.64
28 ASN −4.78 −0.09 −0.03 −0.06 −0.05 −0.19 −0.10 −0.22 −0.07 −0.08 −0.14
39 PRO −0.84 −0.19 −0.09 −0.13 −0.24 −0.20 −0.31 −0.32 −0.11 −0.13 −0.17
41 HIS −6.74 −6.56 −2.93 −5.41 −3.58 −3.79 −5.38 −7.78 −4.18 −3.02 −2.99
44 CYS −1.02 −0.13 −0.09 −0.07 −1.37 −0.67 −0.05 −2.50 −0.37 −0.09 −0.43
45 THR −0.60 −0.32 −0.24 −0.06 −1.10 −0.59 −0.02 −1.76 −0.26 −0.17 −0.47
46 SER −0.91 −1.79 −1.54 −0.62 −4.26 −1.45 −0.07 −3.53 −1.28 −1.79 −2.70
49 MET −4.39 −2.37 −3.14 −2.14 −5.57 −4.18 −1.07 −5.46 −2.23 −2.17 −3.93
52 PRO −0.76 −0.06 −0.08 −0.08 −0.03 −0.19 −0.01 −0.07 −0.02 −0.06 −0.04
54 TYR −0.65 −0.12 −0.45 −0.22 −0.14 −0.54 −0.15 −0.17 −0.11 −0.09 −0.05
119 ASN −0.16 −0.02 −0.07 −0.09 −0.02 −1.41 −0.02 −0.44 −0.05 −0.02 −0.05
140 PHE −0.19 −0.98 −0.04 −0.09 −0.02 −0.06 −0.80 −0.08 −0.17 −0.35 −1.81
141 LEU −0.28 −1.16 −0.10 −0.23 −0.03 −0.09 −1.00 −0.05 −0.27 0.49 −2.64
142 ASN −3.50 −4.39 −3.46 −3.66 −0.59 −2.89 −6.70 −4.56 −4.58 −5.50 −6.82
143 GLY −2.23 −0.75 −0.96 −0.36 −0.37 −2.34 −1.87 −3.77 −1.50 −2.48 −2.11
144 SER −13.05 −1.42 −0.12 −0.17 −0.10 −0.31 −2.09 −1.19 −0.60 −5.29 −2.33
145 CYS −66.34 −3.22 −0.71 −1.53 −1.59 −2.09 −3.95 −4.27 −1.50 −2.96 −3.83
146 GLY −10.20 −0.02 −0.01 −0.03 −0.03 −0.02 −0.06 −0.04 −0.03 −0.06 −0.06
147 SER −0.64 −0.05 −0.01 −0.02 −0.01 −0.02 −0.06 −0.05 −0.02 −0.02 −0.10
163 HIS −3.88 −1.65 −0.13 −0.38 −0.14 −0.17 −2.82 −0.40 −0.63 −1.22 −1.18
164 HIS −3.92 −4.89 −1.41 −3.65 −1.80 −1.56 −5.26 −5.44 −1.30 −2.51 −2.53
165 MET −5.49 −7.83 −4.16 −4.63 −3.46 −3.65 −5.27 −4.91 −4.74 −6.50 −4.43
166 GLU −7.31 −6.67 −6.05 −6.76 −0.82 −1.77 −17.06 −6.44 −4.91 −14.38 −23.80
167 LEU −1.67 −1.36 −1.26 −2.11 −0.63 −1.28 −1.92 −0.78 −1.31 −2.06 −1.16
168 PRO −2.73 −1.17 −1.11 −2.50 −1.26 −2.66 −2.55 −0.35 −1.18 −2.15 −0.91
170 GLY −0.05 −0.08 −0.01 −0.03 −0.02 −0.07 −0.54 −0.01 −0.03 −0.11 −0.17
172 HIS −0.17 −1.15 −0.09 −0.18 −0.07 −0.10 −0.70 −0.09 −0.33 −1.07 −1.07
186 VAL −0.31 −0.61 −0.28 −0.18 −0.33 −0.37 −0.09 −0.60 −0.27 −0.28 −0.29
187 ASP −1.49 −1.29 −2.24 −1.36 −3.74 −1.90 −2.85 −2.05 −1.64 −1.34 −1.17
188 ARG −1.60 −2.04 −1.94 −1.74 −1.68 −2.34 −0.57 −1.75 −1.85 −1.82 −1.17
189 GLN −5.25 −13.79 −5.90 −11.52 −8.10 −7.69 −2.27 −6.11 −8.78 −10.07 −6.93
190 THR −1.42 −1.56 −3.94 −2.43 −1.55 −3.84 −0.05 −1.08 −3.22 −0.99 −0.60
191 ALA −1.65 −2.48 −0.23 −0.68 −1.52 −1.56 −0.03 −0.16 −0.81 −0.46 −0.13
192 GLN −2.24 −3.48 −3.96 −2.28 −1.13 −1.80 −0.16 −1.23 −6.28 −1.72 −0.75