Table 4.

Quantitative baseline expression of 20 genes differentially expressed in persistent arthritis [i.e. rheumatoid arthritis (RA) and undifferentiated arthritis (UA)] relative to healthy control group.

Gene	RA T0/HC			UA T0/HC			SLA T0/HC			NIA T0/HC
	T0	P-Value	BH Q-Value	T0	P-Value	BH Q-Value	T0	P-Value	BH Q-Value	T0	P-Value	BH Q-Value
CAMTA1	1.44	4.23 × 10−3	1.16 × 10−2	1.30	3.66 × 10−1	6.05 × 10−1	1.39	1.02 × 10−2	5.43 × 10−2	1.43	3.29 × 10−2	1.05 × 10−1
CARD6	1.61	1.54 × 10−3	5.29 × 10−3	1.62	1.55 × 10−2	9.27 × 10−2	1.51	2.75 × 10−3	2.64 × 10−2	1.91	4.39 × 10−4	7.03 × 10−3
CLEC4D	1.43	1.60 × 10−2	3.34 × 10−2	0.98	2.72 × 10−1	4.98 × 10−1	1.13	6.66 × 10−1	7.43 × 10−1	0.95	4.52 × 10−1	6.03 × 10−1
CUX1	1.25	5.26 × 10−5	6.31 × 10−4	1.06	1.11 × 10−1	3.13 × 10−1	1.30	1.59 × 10−3	2.54 × 10−2	1.21	2.04 × 10−3	1.63 × 10−2
CXCL5	1.94	1.03 × 10−2	2.35 × 10−2	1.10	9.59 × 10−1	9.91 × 10−1	1.12	5.39 × 10−1	6.82 × 10−1	1.31	3.11 × 10−1	4.34 × 10−1
EPHB2	2.10	5.42 × 10−4	2.46 × 10−3	0.79	9.91 × 10−1	9.91 × 10−1	1.05	5.40 × 10−1	6.82 × 10−1	1.03	9.94 × 10−1	9.97 × 10−1
IFI27	3.30	3.90 × 10−3	1.16 × 10−2	3.27	2.48 × 10−3	2.98 × 10−2	4.11	1.98 × 10−2	8.65 × 10−2	2.28	5.42 × 10−2	1.45 × 10−1
IFI44L	1.34	1.04 × 10−1	1.46 × 10−1	1.80	4.23 × 10−2	1.84 × 10−1	1.31	3.97 × 10−1	5.77 × 10−1	1.13	8.87 × 10−1	9.97 × 10−1
IFIT1	1.93	4.35 × 10−3	1.16 × 10−2	1.98	1.80 × 10−2	9.58 × 10−2	1.73	1.20 × 10−1	2.88 × 10−1	1.27	6.14 × 10−2	1.55 × 10−1
IRF5	1.08	6.83 × 10−1	7.20 × 10−1	0.90	8.26 × 10−1	9.91 × 10−1	1.16	1.75 × 10−1	3.32 × 10−1	1.36	1.80 × 10−3	1.63 × 10−2
KDM6A	0.88	1.77 × 10−1	2.29 × 10−1	1.17	4.79 × 10−2	1.91 × 10−1	0.88	3.11 × 10−1	4.98 × 10−1	1.19	6.58 × 10−2	1.58 × 10−1
KIAA0922	1.04	1.90 × 10−2	3.67 × 10−2	1.10	1.30 × 10−2	9.27 × 10−2	1.04	5.49 × 10−2	1.88 × 10−1	1.06	8.22 × 10−3	4.51 × 10−2
MS4A4A	2.19	9.04 × 10−6	1.45 × 10−4	1.07	6.38 × 10−1	9.01 × 10−1	1.16	2.48 × 10−1	4.42 × 10−1	1.07	8.83 × 10−2	1.70 × 10−1
PDZK1IP1	1.67	2.06 × 10−2	3.74 × 10−2	1.51	8.57 × 10−1	9.91 × 10−1	0.57	1.18 × 10−1	2.88 × 10−1	1.03	6.90 × 10−1	8.27 × 10−1
PROS1	1.86	1.91 × 10−2	3.67 × 10−2	0.80	3.97 × 10−1	6.14 × 10−1	1.18	1.12 × 10−1	2.88 × 10−1	1.75	8.46 × 10−3	4.51 × 10−2
SEMA4D	1.06	1.01 × 10−1	1.46 × 10−1	1.39	1.60 × 10−3	2.98 × 10−2	1.26	1.19 × 10−2	5.72 × 10−2	1.15	5.34 × 10−2	1.45 × 10−1
SETD5	0.81	2.10 × 10−2	3.74 × 10−2	1.15	1.75 × 10−1	4.21 × 10−1	0.94	7.31 × 10−1	7.80 × 10−1	0.99	9.19 × 10−1	9.97 × 10−1
SIGLEC1	2.28	5.97 × 10−3	1.51 × 10−2	2.12	6.34 × 10−2	2.34 × 10−1	1.28	8.52 × 10−2	2.40 × 10−1	1.32	5.58 × 10−1	7.23 × 10−1
ST6GALNAC1	0.80	6.90 × 10−1	7.20 × 10−1	2.79	2.30 × 10−3	2.98 × 10−2	0.86	6.87 × 10−1	7.49 × 10−1	1.43	1.00 × 10−1	1.85 × 10−1
ZNF91	0.72	5.82 × 10−2	9.42 × 10−2	1.26	1.01 × 10−1	3.04 × 10−1	0.86	3.47 × 10−1	5.34 × 10−1	1.12	7.83 × 10−2	1.63 × 10−1

T0, time at baseline.