Table 1.
Alignment of 4-coumaroyl CoA ligase (4CL), flavonoid 3′-hydroxylase (F3′H), flavonol synthase (FLS) and flavonol-3-O-glucoside L-rhamnosyltransferase related amino acid sequences in Capparis spinosa with other plants.
| Genes (Description) | Species | E-value | Sequence identity (%) | GenBank Numbers |
|---|---|---|---|---|
| 4CL (4-coumarate-CoA ligase) | Camelina sativa | 6e-23 | 65% | XP_010484070.1 |
| Eutrema salsugineum | 6e-23 | 65% | XP_024007548.1 | |
| Camelina sativa | 7e-23 | 65% | XP_010460206.1 | |
| Raphanus sativus | 1e-22 | 66% | XP_018441958.1 | |
| Nelumbo nucifera | 2e-22 | 65% | XP_010250796.1 | |
| Tarenaya hassleriana | 3e-22 | 65% | XP_010520611.1 | |
| Capsella rubella | 4e-22 | 63% | XP_006280253.1 | |
| Arabidopsis lyrata | 5e-22 | 63% | XP_002866551.1 | |
| Brassica napus | 7e-22 | 66% | XP_013701364.1 | |
| F3′H (Flavonoid-3′-hydroxylase) | Matthiola incana | 5e-18 | 91% | AAG49301.1 |
| Raphanus sativus | 5e-18 | 91% | BAX90120.1 | |
| Brassica napus | 6e-18 | 91% | XP_013715260.1 | |
| Brassica rapa | 7e-18 | 91% | ABY89687.1 | |
| Eutrema salsugineum | 7e-18 | 88% | XP_006399285.1 | |
| Brassica oleracea | 7e-18 | 91% | XP_013606999.1 | |
| Camelina sativa | 1e-17 | 88% | XP_010423152.1 | |
| Fagopyrum esculentum | 2e-16 | 88% | ADT63065.1 | |
| FLS (Flavonol synthase) | Parrya nudicaulis | 6e-15 | 91% | ADY02821.1 |
| Camelina sativa | 7e-15 | 91% | XP_010484104.1 | |
| Parrya nudicaulis | 7e-15 | 91% | ADY02802.1 | |
| Lactuca sativa | 1e-14 | 82% | XP_023751792.1 | |
| Lactuca sativa | 1e-11 | 85% | BAG12186.1 | |
| Ipomoea purpurea | 2e-14 | 88% | AFP53278.1 | |
| Ziziphus jujuba | 2e-14 | 88% | XP_015879930.1 | |
| Morus notabilis | 3e-14 | 91% | XP_010092364.1 | |
| Jatropha curcas | 3e-14 | 88% | XP_012078184.1 | |
| RT (Flavonol-3-O-glucoside L-rhamnosyltransferase) | Tarenaya hassleriana | 1e-127 | 69% | XP_010537036.1 |
| Capsella rubella | 1e-117 | 61% | XP_006281795.1 | |
| Jatropha curcas | 3e-116 | 61% | XP_012074195.1 | |
| Herrania umbratica | 2e-115 | 62% | XP_021288606.1 | |
| Arabidopsis thaliana | 2e-115 | 60% | NP_200212.1 | |
| Hevea brasiliensis | 4e-115 | 63% | XP_021677578.1 | |
| Gossypium hirsutum | 4e-115 | 61% | XP_016702871.1 | |
| Arabidopsis thaliana | 3e-112 | 60% | BAE98680.1 | |
| Arabidopsis thaliana | 6e-112 | 60% | AAM65481.1 |