Table 4.
Plasmid repertoire of carbapenem-resistant E. coli strain 14ARS_NMC0074.
| Plasmid | Size (bp) | Replicons | AMR genes | Match accession (size) | Accession |
|---|---|---|---|---|---|
| p14ARS_NMC0074-2 | 146,817 | IncA/C2 | blaNDM-1, blaOXA-10, aadA1, aph(3’)-VI, aph(3′)-Ia, mph(A), cmlA1, floR, sul1, sul2, dfrA14, qnrS1, arr-2 | NA | LR697127 |
| p14ARS_NMC0074-5 | 51,479 | IncX3 | blaOXA-181, qnrS1 | CP024806.1 (51,479 bp) | LR697131 |
| p14ARS_NMC0074-4 | 81,712 | IncFII/IncFIA | blaCTX-M-15, blaTEM-1B, blaOXA-1, aadA5, aac(6′)-Ib-cr, sul1, tet(B), dfrA17 | CP024805.1 (111,310 bp) | LR697131 |
| p14ARS_NMC0074-3 | 82,418 | IncFII | blaTEM-1, mph(A), erm(B) | NA | LR697130 |
| p14ARS_NMC0074-6 | 2088 | Col(BS512) | – | CP024803.1 (2088 bp) | LR697133 |
The replicons and AMR genes were identified with the PlasmidFinder and ResFinder databases, respectively. The match accession indicates the accession code when at least one match of more than 90% query sequence coverage and 99% identity was found in the NCBI nucleotide database.
NA not available.