Table 3.
Underlying Secondary Structure Elements in the Amide I Profile of the Nonapeptides and Fractional Areas
Position (Assignment) | hN3 | hN4 | hN5 | hN6 |
---|---|---|---|---|
∼1690 (random) | 20 | 20 | 24 | 25 |
∼1680 (turn) | 41 | 40 | 37 | 38 |
∼1660 (β-strand) | 26 | 23 | 21 | 25 |
∼1640 (turn) | 13 | 17 | 18 | 12 |
Fractional Areas | ||||
Random | 20 | 20 | 24 | 25 |
Turn | 54 | 57 | 55 | 50 |
β-strand | 26 | 23 | 21 | 25 |
Component positions are ±5 cm−1. During the computation, their widths were kept between 15 and 25 cm−1. The figures correspond to the normalized areas of the components expressed in percent of the whole amide I profile. Fractional areas estimate the global secondary structures with an accuracy of ±5% (22).