Table 2.

Top 20 ATP‐consuming upregulated genes at the PFR outlet (P5) after 25 h. ATP costs for transcription and translation as well as log₂ fold changes are given for individual genes.

Gene	Transcription	Translation	Σ	log2‐fold	Function
oprI	0.67	1.48	2.15	0.30	Major outer membrane lipoprotein
rpoS	0.48	1.04	1.52	0.70	RNA polymerase sigma S factor
rmf	0.43	0.97	1.40	0.03	Ribosome modulation factor
oprF	0.38	0.84	1.23	0.41	Porin F
fliC	0.34	0.74	1.07	0.52	Flagellin
oprB‐I	0.31	0.67	0.99	0.53	Carbohydrate‐selective porin
tufB	0.26	0.57	0.82	0.68	Elongation factor Tu‐B
fusA	0.23	0.50	0.72	0.68	Elongation factor G 1
hpf	0.21	0.46	0.67	0.42	Ribosome hibernation promoting factor
rpsO	0.19	0.42	0.61	0.46	30S ribosomal protein S15
rplL	0.18	0.39	0.57	0.23	50S ribosomal protein L7/L12
yohC	0.17	0.37	0.54	1.50	Inner membrane protein
yeaG	0.17	0.37	0.54	1.06	Protein kinase
rplJ	0.17	0.37	0.54	0.29	50S ribosomal protein L10
rpsS	0.17	0.37	0.54	0.32	30S ribosomal protein S19
groL	0.14	0.31	0.45	0.57	Chaperonin GroEL
ygaU	0.14	0.30	0.43	0.29	Murein cross‐linking regulator
proC	0.13	0.28	0.40	0.42	Pyrroline‐5‐carboxylate reductase
rpoA	0.12	0.26	0.37	0.51	DNA‐directed RNA polymerase subunit alpha
tufA	0.11	0.25	0.37	0.40	Elongation factor Tu‐A
Σ	4.98	10.96	15.94