Table 2.
Prevalence of different HPV Genotypes with Linear Assay and SPF10 PCR-DEIA-LiPA25 System within the Oral HIM Sub-cohort that Underwent Both Tests.
| HPV Genotypea | Linear Array N (%) |
SPF10 PCR-DEIA-LiPA25 System N (%) |
SPF10 PCR-DEIA-LiPA25 System/Linear Array Prevalence Ratio |
|---|---|---|---|
| 6 | 3 (0.21) | 13 (0.90) | 4.3 |
| 11 | 2 (0.14) | 3 (0.21) | 1.5 |
| 16 | 7 (0.48) | 26 (1.82) | 3.7 |
| 18 | 0 (0.00) | 4 (0.28) | N/A |
| 31 | 0 (0.00) | 4 (0.28) | N/A |
| 33 | 0 (0.00) | 1 (0.07) | N/A |
| 35 | 1 (0.07) | 4 (0.28) | 4.0 |
| 39 | 1 (0.07) | 7 (0.48) | 7.0 |
| 40 | 0 (0.00) | 0 (0.00) | N/A |
| 42 | 0 (0.00) | 0 (0.00) | N/A |
| 45 | 0 (0.00) | 2 (0.14) | N/A |
| 51 | 3 (0.21) | 13 (0.90) | 4.3 |
| 52 | 1 (0.07) | 7 (0.48) | 7.0 |
| 53 | 1 (0.07) | 9 (0.62) | 9.0 |
| 54 | 0 (0.00) | 2 (0.14) | N/A |
| 56 | 0 (0.00) | 8 (0.55) | N/A |
| 58 | 1 (0.07) | 3 (0.21) | 3.0 |
| 59 | 2 (0.14) | 2 (0.14) | 1.0 |
| 66 | 4 (0.27) | 12 (0.83) | 3.0 |
| 68 | 0 (0.00) | 1 (0.07) | N/A |
| 70 | 2 (0.14) | 1 (0.07) | 0.5 |
| Any HPV genotype | 28 (1.92) | 126 (8.66) | 4.5 |
| Any High-Risk HPV | 16 (1.1) | 76 (5.22) | 4.8 |
| Any Low-Risk HPV | 12 (0.82) | 53 (3.64) | 4.4 |
| HPV type 6 and/or 11 and/or 16 and/or 18 | 12 (0.82) | 46 (3.16) | 3.8 |
| HPV type 6 and/or 11 and/or 16 and/or 18 and/or 31 and/or 33 and/or 45 and/or 52 and/or 58 | 14 (0.96) | 61 (4.19) | 4.4 |
a
Total sample size for all HPV types: 1455.