Table 1. List of Pseudopimelodidae sequences generated in this study and GenBank sequences used for analysis.
| Species | Country | Origin | GenBank accession (Haplotype) | Reference | |
|---|---|---|---|---|---|
| rag2 | cox1 | ||||
| Pseudopimelodus schultzi | C | HZ1-Magdalenar | MH595766 (H18) | MH553588 (H18) | 1 |
| Pseudopimelodus schultzi | C | HZ2-Magdalenar | MH595752 (H4) | MH553578 (H8) | 1 |
| Pseudopimelodus schultzi | C | HZ3-Magdalenar | MH595751 (H3) | MH553580 (H10) | 1 |
| Pseudopimelodus schultzi | C | HZ3-Caucar | MH595749–MH595750 (H1-2) | MH553573–MH553577 (H3-7), MH553579 (H9), MH553581–MH553582 (H11-H12) | 1 |
| Pseudopimelodus schultzi | C | HZ3-San Jorger | MH595768 (H20) | MH553571–MH553572 (H1-2) | 1 |
| Pseudopimelodus schultzi | C | HZ4-Caucar | MH595753 (H5), MH595758 (H10), MH595764 (H16), MH595767 (H19) | MH553591 (H21), MH553593–MH553594 (H23-24) | 1 |
| Pseudopimelodus schultzi | C | HZ4-Caucar | MH595756 (H8), MH595759–MH595760 (H12-13), MH595763 (H15), MH595765 (H17) | MH553583–MH553586 (H13-16), MH553587 (H17), MH553589–MH553590 (H19-20) | 1 |
| Pseudopimelodus schultzi | C | HZ5-Atrator | MH595757 (H9), MH595762 (H14) | MH553592 (H22) | 1 |
| Pseudopimelodus schultzi | C | HZ5-Sinúr | MH595754–MH595755 (H6-7), MH595759 (H11) | MH553595–MH553596 (H25-26) | 1 |
| Pseudopimelodus bufonius | C | HZ6-Orinocob | MH595769–MH595771 (H21-23), MH595773 (H25) | MH553597 (H27), MH553600 (H30) | 1 |
| Pseudopimelodus bufonius | C | HZ7-Amazonb | MH595772 (H24), MH595774 (H26) | MH553598–MH553599 (H28-29), MH553601–MH553603 (H31-33) | 1 |
| Pseudopimelodus bufonius | V | Maracaibob | DQ492359 | — | 2 |
| Pseudopimelodus mangurus | B | Paranapanemar | — | EU179816 | 3 |
| Pseudopimelodus mangurus | B | Uruguayr | DQ492360 | — | 2 |
| Batrochoglanis raninus | B | Aquarium | — | EU179809 | 3 |
| Batrochoglanis raninus | P | Nanayb | DQ492361 | — | 4 |
| Cephalosilurus apurensis | V | Orinocob | DQ486780 | — | 5 |
| Cephalosilurus apurensis | V | Orinocob | — | EU179818 | 3 |
| Cruciglanis pacifici | C | Anchicayár | MH595776 (AOL94) | MH553607 (AOL94), MH553608 (AOL23) | 1 |
| Cruciglanis sp. | C | Mirar | MH595775 (AOL81) | MH553607 (AOL24) | 1 |
| Lophiosilurus alexandri | B | São Franciscor | — | HM405152 | 6 |
| Lophiosilurus alexandri | B | São Franciscor | JX899754 | — | 2 |
| Microglanis sp. | C | Acaciasr | MH595777 (AOL95) | MH553604 (AOL95) | 1 |
| Rhyacoglanis anulatus | C | Negror | (AOL97-98) | MH553605–MH553606 (AOL97-98) | 1 |
| Rhyacoglanis pulcher | — | — | — | EU179812 | 3 |
| Pimelodus yuma | C | HZ1-Magdalenar | MH595780 | MH553610 | 1 |
| Pseudoplatystoma magdaleniatum | C | HZ1-Magdalenar | MH595781 | MH553611 | 1 |
Notes.
- C
- Colombia
- V
- Venezuela
- B
- Brazil
- P
- Perú
- b
- Basin
- r
- River
- HZ1
- Magdalena river-upper sector
- HZ2
- Magdalena River-middle sector
- HZ3
- Magdalena River and Cauca River- lower sectors and San Jorge River
- HZ4
- Cauca River-upper and middle sectors
- HZ5
- Caribbean drainage - Atrato River and Sinú River
- HZ6
- Amazon River basin
- HZ7
- Orinoco River basin
1
This study.
3
C Oliveira, 2018, pers. comm.
GPS coordinates for each haplotype are provided in the Supplemental Information.