Table 1.
Molecular identification of plant-parasitic nematode species in the rooting zone of hop cultivars in a Florida field soil.
| Common name | GenBank accession | Closest accession | Percent identity (%) | Species |
|---|---|---|---|---|
| 28S Gene region a | ||||
| Dagger | MN922336.1 | KX931065.1 | 97.5 | Xiphinema setariae/vulgare complex |
| Lesion | MN922338.1 | MG745329.1 | 98.8 | Pratylenchus brachyurus |
| Ring | MN922337.1 | FN433872.1 | 98.1 | Mesocriconema xenoplax |
| Spiral | MN922339.1 | AB602601.1 | 99.1 | Helicotylenchus sp. |
| Stubby-Root | MN922340.1 | MG938546.1 | 100 | Paratrichodorus minor |
| 18S Gene region b | ||||
| Lesion | MN911166.1 | KY677821.1 | 98.8 | Pratylenchus brachyurus |
| Spiral | MN911167.1 | MK796435.1 | 98.8 | Helicotylenchus dihystera |
| Stubby-Root | MN911168.1 | KJ934126.1 | 100 | Paratrichodorus minor |
Notes: aAmplified with D2A/D3B primer set. bAmplified with 1813/2646 primer set.