Table S1.
Summary statistics for Aphelenchoides fragariae transcriptome assembly.
| Basic sequence statistics | Number |
|---|---|
| Total raw reads | 324,895,970 |
| Mean read length (bp) | 125 |
| Raw read GC content | 42% |
| Mean read PHRED score after filtering and trimming | 36 |
| Number of genes | 48,541 |
| Number of isoforms | 147,621 |
| Assembly N50 (of all isoforms) | 1293 bp |
| Ex90N50 | 1470 bp |
| Mean length of all isoforms | 882 bp |
| Top BLASTx-hit species | Toxocara canis |
| Percent of gene with at least one BLASTx hit (E ≤ 1.0-3) | 35% |
| Percent of gene with at least one GO annotation | 23% |