Table 2.

Contingency table for LAMP-tested BD SurePath clinical samples identified using both FAM bands and LFS readout

		LAMP
	24 total samples	10 positive	14 negative
PCR	15 positive	9 TP	6 FN
	9 negative	1 FP	8 TN

The LAMP-tested patient samples are analyzed using a 2 × 2 contingency table. The test compares PCR (gold standard assay) to LAMP (experimental assay). PCR results and analysis are located in ESM 1. PCR-positive samples are samples quantified as having a concentration higher than 72.44 copies/μl and the opposite is true for PCR-negative samples. LAMP-positive samples are calculated as a sample with 5 LP results. There are a total of 9 true positive (TP), 8 true negative (TN), 6 false negative (FN), and 1 false positive (FP) samples