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. 2020 Jun 1;10(6):284. doi: 10.1007/s13205-020-02270-w

Table 1.

Summary of reference based assembled transcripts from RNA-Seq of the susceptible and resistant genotypes of Arachis hypogea at control and infected stages

SI RI SC RC
Number of transcripts 14,916,661 17,502,719 17,336,240 36,625,310
RNA-Seq length (bp) 2,388,143,923 2,761,143,610 2,928,728,266 5,127,297,546
Average transcript length (bp) 160 158 169 140
Total read counts after quality filtration 12,669,594 (84.94%) 14,779,667 (84.44%) 15,038,010 (86.74%) 31,262,640 (85.36%)
Number of uniquely mapped reads 4,999,181 (39.46%) 10,218,232 (69.14%) 10,728,674 (71.34%) 19,233,708 (61.52%)
Number of reads mapped to multiple loci 2,099,015 (16.57%) 3,747,309 (25.35%) 3,757,635 (24.99%) 9,796,877 (31.34%)
Average contig length after mapping (bp) 137 147 152 125