Table 2.
Random and gene-specific primers used for validation of RNA-Seq data using RT-qPCR
| Sr. No | Gene ID | Gene name | Primer sequence (forward) | Primer sequence (reverse) |
|---|---|---|---|---|
| 1 | Araip.N03N5 | Rubisco methyltransferase | TGTTTACACCAGTTGACGGATGA | CTGCAAACACGCATGAAGCA |
| 2 | Araip.R9908 | Trypsin-like serine protease | TGGGCTAAACCCGACAACAA | TTCTGCAAAAGACGGCTCAC |
| 3 | Araip.77S0D | Uncharacterised protein | AAGCCTCCTGCTGACAAACC | CGCAACGAAGAAAGCTCTGG |
| 4 | Araip.C41LK | Terpene synthase | TGTGGAGTACATCCATCCAACT | CACTATGACTGGAGTTTGGCTCT |
| 5 | Aradu.I4JWW | MYB transcription factor | CCCACACCAGGTGCCTTTAT | ATCTGGAACCCAACGGACAC |
| 6 | Aradu.Z1Y2A | Serine/threonine kinase | GCCTCTTCCAAACCAGCTCT | TCGCATGGTCACATCGTCAT |
| 7 | Aradu.P9J09 | Cellulose synthase | AAGGCACACCGAAGTACCAA | GGTTAAGGACAGGGTTAAGGC |
| 8 | Aradu.11T0C | Transcription initiation factor | TGTGTCCCTCATTCGTGCTT | TGGTTGCGGTTGATCCTTGT |
| 9 | Aradu.VE705 | WRKY family TF | CTCGCCAGTATATGGCCTCC | TTAGGGCAACTCACCGGAAC |
| 10 | Aradu.QH0IG | Cytochrome P450 protein | CTCGCCATGCTCTCTAGCTT | GTGGGTCAGTATGTTCCCCA |
| 11 | Aradu.D14Q2 | Thaumatin protein | ATGTTTACACCAGTTGACGGA | TGCAAACACGCATGAAGCATT |
| 12 | Araip.DAL9A | Protein kinase | GGCTGAAAGACACTTGATGGC | TAACGGTACAGGAGGCTGAC |
| 13 | Aradu.9AI6Q | Chitinase family protein | GGGAGTTAGTGGGTTGTAGCG | GTGCAAGGAGATGAAAGGCG |
| 14 | Aradu.V83DR | Transmembrane protein | TGTCTCTGGCAGATCAACAC | AGCAATGCTTGCACGATGTC |
| 15 | Aradu.R4V51 | TIR-NBS-LRR protein | TGAGTCTTTGTATCCCACTTCATCA | ACAATCGTATATAGTACGGAGGGC |