TABLE 1.
Summary of bacterial diversity metrics of samples
| Sample group | Sampling point | No. of phylaa | No. of generab | Species richness (d) | Pielou’s evenness (J′) | Shannon diversity (H′, loge) |
|---|---|---|---|---|---|---|
| Processing | Prescald | 18 | 361 | 78.2 | 0.5 | 3.1 |
| Postplucker | 17 | 330 | 71.4 | 0.5 | 2.8 | |
| Pre-immersion chill | 15 | 330 | 71.4 | 0.5 | 2.7 | |
| Post-immersion chill | 16 | 346 | 74.9 | 0.5 | 2.7 | |
| Post-air chill | 17 | 363 | 78.6 | 0.4 | 2.4 | |
| Shelf life | Start of shelf life | 20 | 452 | 97.9 | 0.4 | 2.5 |
| End of shelf life | 10 | 118 | 25.4 | 0.1 | 0.5 | |
| Environmental | Scald water | 11 | 186 | 40.2 | 0.2 | 1.3 |
| Immersion chill water | 16 | 323 | 69.9 | 0.5 | 2.7 | |
| Air from air chill room | 18 | 285 | 61.7 | 0.5 | 2.8 | |
| Wall in air chill room | 9 | 104 | 22.4 | 0.3 | 1.2 | |
| Shackles through air chill room | 16 | 360 | 78.0 | 0.5 | 2.8 | |
| Total | 29 | 756 | 163.9 | 0.4 | 2.9 |
The number of phyla identified for each sampling point.
The number of genera identified for each sampling point.