Table 4.
The mutation type of the SNPs located in the candidate genes
| Gene model | Chromosome | Position | Resistant parent allele | Susceptible parent allele | Mution type |
|---|---|---|---|---|---|
| Arahy.LFE0TK | Arahy.03 | 5,689,199 | A | T | noncoding DNA regions |
| Arahy.03 | 5,689,634 | T | C | T → C, Glu → Gly | |
| Arahy.03 | 5,692,237 | A | G | A → G, Cys → Arg | |
| Arahy.03 | 5,694,410 | C | T | C → T, Arg → His | |
| Arahy.03 | 5,696,415 | A | C | A → C, Ser → Ala | |
| Arahy.Q7VTCQ | Arahy.04 | 125,905,992 | T | C | noncoding DNA regions |
| Arahy.04 | 125,907,949 | A | G | noncoding DNA regions | |
| Arahy.04 | 125,909,638 | C | T | noncoding DNA regions | |
| Arahy.04 | 125,911,313 | G | T | Synonymous mutation, Ala | |
| Arahy.04 | 125,912,343 | G | T | G → T, Asp→Tyr | |
| Arahy.1RZ0PJ | Arahy.04 | 125,980,437 | C | G | C → G, Thr → Ser |
| Arahy.04 | 125,981,121 | A | C | A → C, Lys → Thr | |
| Arahy.04 | 125,981,989 | A | C | A → C, Lys → Asp | |
| Arahy.00XS3D | Arahy.05 | 7,865,324 | T | G | noncoding DNA regions |
| Arahy.IY6P5S | Arahy.05 | 8,315,940 | T | C | noncoding DNA regions |
| Arahy.MR7539 | Arahy.14 | 140,432,094 | G | C | G → C, Lys → Asp |
| Arahy.14 | 140,432,405 | T | A | T → A, Phe → Tyr | |
| Arahy.14 | 140,432,499 | T | G | Synonymous mutation, Val | |
| Arahy.14 | 140,432,542 | G | C | G → C, Val → Leu | |
| Arahy.14 | 140,432,546 | T | G | T → G, Val → Gly | |
| Arahy.14 | 140,432,725 | G | T | G → T, Gly → Cys | |
| Arahy.14 | 140,432,848 | G | C | G → C, Glu → Gln | |
| Arahy.NC1Z37 | Arahy.17 | 26,849,446 | C | T | noncoding DNA regions |
| Arahy.17 | 26,855,030 | C | T | noncoding DNA regions |