Table 2. Assembly statistics for the 18 sequenced founder strains.
| Strain | Assembly size (Mb) | Assembly N50 (kb) | Assembly Quality value | Assembly BUSCO (complete) | Total PacBio data (Mb) | PacBio read N50 (kb) | Total Illumina data (Mb) | Type of Illumina reads | × PacBio coverage | × Illumina coverage |
|---|---|---|---|---|---|---|---|---|---|---|
| A5 | 12.13 | 757 | 48.8 | 0.990 | 737 | 11.10 | 3396 | PE100 | 61.4 | 283.0 |
| A6 | 11.98 | 913 | 46.6 | 0.986 | 620 | 11.68 | 4079 | PE150 | 51.7 | 340.0 |
| A7 | 12.62 | 901 | 66.2 | 0.990 | 3979 | 5.97 | 2775 | PE100 | 331.6 | 231.3 |
| A8 | 12.03 | 917 | 55.5 | 0.993 | 622 | 11.79 | 3420 | PE100 | 51.9 | 285.0 |
| A9 | 12.53 | 571 | 53.0 | 0.993 | 5845 | 5.10 | 2769 | PE100 | 487.1 | 230.7 |
| A11 | 12.10 | 702 | 49.3 | 0.986 | 644 | 12.03 | 2758 | PE100 | 53.7 | 229.8 |
| A12 | 12.00 | 795 | 45.5 | 0.993 | 613 | 11.83 | 3563 | PE100 | 51.1 | 296.9 |
| B5 | 12.32 | 738 | 46.5 | 0.990 | 741 | 10.97 | 3861 | PE100 | 61.7 | 321.8 |
| B6 | 12.10 | 772 | 44.9 | 0.990 | 401 | 11.67 | 2906 | PE100 | 33.4 | 242.2 |
| B7 | 11.91 | 765 | 39.5 | 0.986 | 719 | 11.79 | 4266 | PE100 | 59.9 | 355.5 |
| B8 | 11.99 | 802 | 66.0 | 0.990 | 741 | 12.00 | 3054 | PE100 | 61.8 | 254.5 |
| B9 | 12.40 | 856 | 54.6 | 0.993 | 1083 | 12.05 | 3419 | PE100 | 90.2 | 284.9 |
| B11 | 12.12 | 789 | 55.0 | 0.990 | 765 | 12.13 | 2236 | PE100 | 63.8 | 186.3 |
| B12 | 12.04 | 790 | 48.7 | 0.986 | 804 | 10.79 | 3930 | PE100 | 67.0 | 327.5 |
| AB1 | 12.35 | 901 | 47.9 | 0.993 | 3315 | 5.84 | 3509 | PE150 | 276.3 | 292.4 |
| AB2 | 12.83 | 741 | 66.2 | 0.990 | 5230 | 4.77 | 4230 | PE150 | 435.8 | 352.5 |
| AB3 | 12.44 | 809 | 55.8 | 0.990 | 3254 | 6.21 | 3891 | PE150 | 271.2 | 324.2 |
| AB4 | 12.32 | 800 | 55.7 | 0.990 | 4649 | 6.43 | 4490 | PE150 | 387.4 | 374.2 |
Bold text represents founder strains that were previously sequenced using PacBio technology in Yue et al. (2017). BUSCO, Benchmarking Universal Single-Copy Orthologs; PacBio, Pacific Biosciences.