TABLE 2.
Sequences recovered from NGS data by de novo genome assemblya
| Animal no. | Virus | Segment | Contig length (nt) | GenBank accession no. | Avg coverage (no. of reads) | Closest match by PASC and BLAST (% identity, GenBank accession no.) |
|---|---|---|---|---|---|---|
| 1 | ArBV-1 | S | 3,372 | MN567042 | 14,173.9 | PASC, 74.0, KP071473.1; BLAST, 76.3, KP071671.1 |
| L | 6,883 | MN567044 | 5,232.6 | PASC, 72.7, KR870030.1; BLAST, 74.5, KR870030.1 | ||
| KaBV-1 | L | 7,010 | MN567043 | 7,105.8 | PASC, 72.4, KP071677.1; BLAST, 97.2, KX527584.1 | |
| ArSV-1 | L | 6,780 | MN567045 | 1,413.6 | PASC, 63.3, KR870020.1; BLAST, 67.1, KP071562.1 | |
| UHV-2 | L | 6,813 | MN567046 | 2,765.8 | PASC, 86.4, KR870030.1; BLAST, 87.1, KR870030.1 | |
| FStV-1 | L | 6,831 | MN567047 | 2,233.2 | PASC, 74.1, KR870030.1; BLAST, 75.8, MN567046.1 | |
| SPVV-1 | S | 3,560 | MN567048 | 268.3 | PASC, 21.8, FJ607031.1 BLAST, 69.7, MH483027.1 | |
| L | 3,578 and 2,223 | MN567049 and MN567050 | 35.1 | PASC, NA; BLAST, 65.7, MH778629.1 and 71.8, MH483040.1 | ||
| HFrV-1 | N.A. | 10,718 | MN567051 | 1,698.9 | PASC, NA; BLAST, 66.4, MG600009.1 (query coverage, 28%) | |
| 2 | ArBV-1 | S | 3,372 | MN567052 | 26,110.1 | PASC, 73.7, KP071473.1; BLAST, 76.5, KP071506.1 |
| L | 6,948 | MN567054 | 9,586.7 | PASC, 72.8, KR870030.1; BLAST, 74.4, KR870030.1 | ||
| KaBV-1 | L | 7,009 | MN567053 | 6,688.2 | PASC, 72.3, KP071567.1; BLAST, 97.1, KX527584.1 | |
| AHeV-1 | S | 3,534 | MN567055 | 99.3 | PASC, 22.0, FJ607031.1; BLAST, 64.7, MH483026.1 | |
| L | 5,953 | MN567056 | 28.5 | PASC, 18.7, MG812678.1; BLAST, 67.7, MH483044.1 | ||
| HFrV-1 | NA | 10,549 | MN567057 | 1,073.9 | PASC, NA; BLAST, 67.7, MG600009.1 (query coverage, 28%) | |
| 3 | ArBV-1 | S | 3,351 | MN567058 | 11,236.5 | PASC, 74.0, KP071671.1; BLAST, 75.1, MH503957.1 |
| L | 6,926 | MN567060 | 3,443.9 | PASC, 72.7, KR870030.1; BLAST, 73.9, MH503952.1 | ||
| KaBV-1 | L | 7007 | MN567059 | 2,913.8 | PASC, 72.2, KR870030.1 BLAST, 97.2, KX527584.1 | |
| AHeV-1 | S | 3,598 | MN567061 | 1,433.3 | PASC, 21.8, NC_004294.1; BLAST, 64.7, MH483026.1 | |
| L | 5,961 | MN567062 | 548.3 | PASC, 18.9, MG812678.1; BLAST, 67.5, MH483044.1 | ||
| HFrV-1 | N.A. | 10,574 | MN567063 | 126.8 | PASC, NA; BLAST, 66.4, MG600009.1 (query coverage, 29%) | |
| 4 | PAV-1 | S | 3,464 | MN567064 | 2,071.6 | PASC, 73.3, KP071559.1; BLAST, 72.2, KP071473.1 |
| L | 6,911 | MN567065 | 1,158.3 | PASC, 79.6, KP071549.1; BLAST, 80.0, MH503952.1 | ||
| SauV-1 | L | 6,835 | MN567066 | 523.1 | PASC, 73.2, KP071479.1; BLAST, 74.6, MH483084.1 | |
| GauV-1 | L | 7,203 | MN567067 | 438.3 | PASC, 72.8, KR870030.1; BLAST, 75.5, KP071564.1 |
a
Abbreviations: ArBV-1, Aramboia boa virus 1; KaBV-1, Kaltenbach virus 1; ArSV-1, Arabuta snake virus 1; UHV-2, University of Helsinki virus 2; FStV-1, Frankfurter Strasse virus 1; SPVV-1, SetPatVet virus 1; HFrV-1, Herr Frank virus 1; AHeV-1, Andere Heimat virus 1; PAV-1, Porto Alegre virus 1; SauV-1, Saudades virus 1; GauV-1, Gaucho virus 1; NA, not available.