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. 2020 May 29;11:913. doi: 10.3389/fimmu.2020.00913

Table 2.

Hspa13 mRNA was increased in LPS-induced PBs/PCs.

Gene symbol Affymetrix microarray RNA-sequencing
Fold change Regulation None LPS The ratio of LPS to none
1st 2nd
B-cell marker Cd19 0.21 0.32 Down 20349.00 15874 0.78
Ms4a1 0.43 0.52 Down 25484.96 15411 0.60
GC B cell marker Pax5 0.09 0.29 Down 30458.14 11625 0.38
Bcl6 0.16 0.17 Down 1865.00 403 0.22
PB/PC marker Prdm1 34.05 27.52 Up 244.00 6055 24.82
Xbp1 10.17 8.79 Up 2008.00 15347 7.64
Hspa13 9.23 8.18 Up 430.00 1907 4.43

The splenocytes were separated from three C57BL/6 mice per group. B cells were sorted by B220 microbeads and stimulated for 3 days in vitro by 10 μg/ml LPS. The transcripts in B cells and LPS-stimulated B cells were determined by Affymetrix Microarray and RNA-sequencing. The fold change of B cell-associated genes including CD19 and Ms4a1 (CD20), GC B cell-associated genes including Pax5 and Bcl6, PB/PC-promoting genes including Prdm1 and Xbp1, and the interested gene Hspa13 in LPS-stimulated group to unstimulated group is shown. 1st and 2nd represent 2 independent experiments. Total exon fragments (values) of Cd19, Ms4a1, Pax5, Bcl6, Prdm1, Xbp1, and Hspa13 in B cells (None) and LPS-stimulated B cells (LPS) are also shown.