TABLE 3.
The 18 genes differentially transcribed after the deletion of turA in KT2440 during the stationary phase.
| Locus tag | Gene name | COG | Annotation | Type of regulation |
| PP_0241 | ssuF | H | TOBE domain-containing protein | Up-regulated |
| PP_1924 | PP_1924 | M | Phosphinothricin N-acetyltransferase | Up-regulated |
| PP_3161 | benA* | P | Benzoate dioxygenase subunit alpha | Up-regulated |
| PP_3162 | benB* | Q | Benzoate dioxygenase subunit beta | Up-regulated |
| PP_3163 | benC* | H | Oxidoreductase FAD/NAD(P)-binding domain-containing protein | Up-regulated |
| PP_3164 | benD* | I | 1,6-Dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | Up-regulated |
| PP_3165 | benK* | G | Major facilitator superfamily transporter | Up-regulated |
| PP_3166 | PP_3166* | Q | Catechol 1,2-dioxygenase | Up-regulated |
| PP_3167 | benE-2* | Q | Benzoate transporter | Up-regulated |
| PP_3168 | benF | – | Benzoate-specific porin | Up-regulated |
| PP_3713 | catA* | Q | Catechol 1,2-dioxygenase | Up-regulated |
| PP_3714 | catC* | Q | Muconolactone isomerase | Up-regulated |
| PP_3715 | catB* | M | Muconate and chloromuconate cycloisomerase | Up-regulated |
| PP_3782 | PP_3782* | – | Hypothetical protein | Up-regulated |
| PP_4403 | bkdB | C | Branched-chain alpha-keto acid dehydrogenase subunit E2 | Down-regulated |
| PP_5033 | hutU | E | Urocanate hydratase | Down-regulated |
| PP_5139 | cadA-2 | P | Heavy metal translocating P-type ATPase | Down-regulated |
| PP_5269 | dadX | M | Alanine racemase | Down-regulated |
*These genes were also differentially transcribed after the deletion of turA in KT2440(pCAR1) during the stationary phase.