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. 2020 Jun 4;3(6):e204669. doi: 10.1001/jamanetworkopen.2020.4669

Table 3. CDPoRT Predictive Performance for the Full, Simple, and Parsimonious Versions for Women and Men, by Development and Validation Settingsa.

CDPoRT version Measures of predictive performance Development (70%) Bootstrap validation (development)b Split sample validation (30%) Ontario final model Bootstrap validation (Ontario final model)b Manitoba external validation Sensitivity analysis
No chronic disease history Additional chronic diseases
Full version for women, df = 30 Nagelkerke R2 0.160 0.159 NA 0.160 0.159 NA NA NA
Brier score 0.087 NA 0.119 0.087 NA 0.128 0.090 0.322
Harrell C index 0.779 0.778 0.777 0.767 0.779 0.752 0.774 0.596
Discrimination slope 0.109 NA 0.096 0.089 NA 0.103 0.105 0.035
Calibration in the large 0 0.021 −0.006 0 0.013 0.032 −0.018 0.284
Calibration slope 1 0.994 0.994 1 0.996 0.893 0.952 0.317
Simple version for women, df = 14 Nagelkerke R2 0.144 0.143 NA 0.143 0.143 NA NA NA
Brier score 0.088 NA 0.122 0.089 NA 0.13 0.092 0.319
Harrell C index 0.767 0.767 0.766 0.767 0.766 0.739 0.764 0.590
Discrimination slope 0.092 NA 0.080 0.089 NA 0.081 0.087 0.033
Calibration in the large 0 0.010 −0.005 0 0.007 0.033 −0.016 0.280
Calibration slope 1 0.997 1.010 1 0.998 0.894 0.972 0.293
Parsimonious version for women, df = 24 Nagelkerke R2 0.160 0.158 NA 0.159 0.158 NA NA NA
Brier score 0.087 NA 0.119 0.088 NA 0.128 0.090 0.322
Harrell C index 0.779 0.778 0.776 0.779 0.778 0.752 0.774 0.596
Discrimination slope 0.109 NA 0.095 0.104 NA 0.102 0.104 0.035
Calibration in the large 0 0.017 −0.005 0 0.012 0.03 −0.018 0.284
Calibration slope 1 0.995 0.994 1 0.997 0.885 0.951 0.316
Full version for men df = 30 Nagelkerke R2 0.178 0.176 NA 0.169 0.168 NA NA NA
Brier score 0.091 NA 0.091 0.091 NA 0.129 0.092 0.297
Harrell C index 0.783 0.782 0.769 0.780 0.779 0.775 0.775 0.618
Discrimination slope 0.112 NA 0.103 0.106 NA 0.121 0.106 0.049
Calibration in the large 0 0.021 −0.008 0 0.015 0.013 −0.024 0.244
Calibration slope 1 0.994 0.865 1 0.996 1.007 0.946 0.331
Simple version for men df = 15 Nagelkerke R2 0.159 0.176 NA 0.155 0.154 NA NA NA
Brier score 0.092 NA 0.091 0.092 NA 0.129 0.093 0.294
Harrell C index 0.773 0.773 0.765 0.771 0.771 0.766 0.768 0.614
Discrimination slope 0.093 NA 0.095 0.092 NA. 0.099 0.093 0.045
Calibration in the large 0 0.010 −0.003 0 0.006 0.021 −0.023 0.242
Calibration slope 1 0.997 0.924 1 0.998 1.004 0.971 0.319
Parsimonious version for men df = 25 Nagelkerke R2 0.177 0.176 NA 0.168 0.167 NA NA NA
Brier score 0.091 NA 0.091 0.091 NA 0.129 0.092 0.297
Harrell C index 0.783 0.782 0.769 0.780 0.779 0.775 0.775 0.618
Discrimination slope 0.111 NA 0.103 0.105 NA 0.120 0.105 0.049
Calibration in the large 0 0.018 −0.003 0 0.011 0.017 −0.024 0.244
Calibration slope 1 0.995 0.866 1 0.997 1.006 0.948 0.332
a

As a reference, the predictive performance measures of the female model with all predictors were Nagelkerke R2 = 0.154, Brier score = 0.088, Harrell C index = 0.775, and discrimination slope = 0.106. The predictive performance measures of the male model with all predictors were Nagelkerke R2 = 0.169, Brier score = 0.093, Harrell C index = 0.779, and discrimination slope = 0.107.

b

Some statistics were not calculated during bootstrap validation (rms package).