Table 2.

The sequence information of each sample

Sample	Raw_reads	Clean_Reads	Effective (%)
CK1.1	88,495	80,121	90.54
CK1.2	83,858	80,213	95.65
CK1.3	87,111	80,281	92.16
CK1.4	83,036	80,061	96.42
CK1.5	74,023	69,077	93.32
CK1.6	82,390	80,182	97.32
CK1.7	90,020	85,150	94.59
CK1.8	81,767	76,856	93.99
DIS1.1	82,345	80,179	97.37
DIS1.2	87,301	80,270	91.95
DIS1.3	85,890	80,168	93.34
DIS1.4	84,149	80,055	95.13
DIS1.5	88,427	80,149	90.64
DIS1.6	81,832	80,134	97.93
DIS1.7	88,893	80,148	90.16
DIS1.8	86,681	80,232	92.56

CK: the healthy Yangtze finless porpoise; DIS: the Yangtze finless porpoise infected by Aeromonas veronii